AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03494 ATGGACCCGGTCAACCAAGAAATAAGACCCGAAGCATCACTAATGATTCCCGAAAAACGAAAACGTGGGCGCCCACGAAAAGATCCGAGTGAACGCCGGGCAGCAAAAGCACGTTCACAAGCTGCCCGAATGCCGCCCGGTTACCCCCAACATCACACCACTACACCCCGAATCGACCCAATCCACAATCCAACTGAAGTCATGATCGGTCAAACCGTAACCGGTGTAGTCGAGGCCACTTTTGAAGCCGGTTACCTTCTCGCTGTCAGAATCGGCAACTCAAATATAACCCTAAGAGGCGCGGTTTTCAAGCCAGGTCACACCGCCCCATTGACACCTGAAAATGACGTGGCGCCACATGTCGAAATGATCAAAAGAACCCAAGTCCCATTTCCCGAAATGCAACCGCCAATTCGCAGGCGAAAAAGACGGTCCAAAGAAAAAAACATGCAGCTCGTTACCTACGTTCCAAACGGTGATGAAACACTCCCAAACTCACCTTCTAAAGGAAATTACGTTTTTACCCCTGCGAGAGGAAATGTGACCCCGGTTATTCTTCAACCAAACGGGCCACCACCGAACCAACCGCCACCTCATTTGCGGGCCACACAAGGGAAACCGGTTCACTCGGTTTTGCCATTGGCGGTTTACCCGCCGAACGGGTCAACAAGTCAAGCTTCTGAATCGCAAACGAGTTCACAGTTTACAGGGACTGGAAGTGAAAATGTTTCGGTCAAACAACATGGGACGGATGGTCAACAGGTGGAAGGGGGTGGTAAGTCAAGTGTTGGGAATCAGGAGACAGTTGTGAAAATGGAAACGGATATTGGGGATATGAATGAGCCGCTTTTTGTTGAACCGTTGCAGACTCGACACACGGTTCACCATTTTCAAGGTGCACCGGTGATGGGACCCGTCATGCATACGGGAGCCGGTAGAATGACCGAACTTTTACAGGCTGTTCAACAGAATTTGGGTGATGATCGAAACGGGCATCCATCTGCAAGTTTTGTTGTTAACCGTAACAGAGATGAAGAAACTGATGAGGCAGGAAGGCTGTAA 1062 50.0 MDPVNQEIRPEASLMIPEKRKRGRPRKDPSERRAAKARSQAARMPPGYPQHHTTTPRIDPIHNPTEVMIGQTVTGVVEATFEAGYLLAVRIGNSNITLRGAVFKPGHTAPLTPENDVAPHVEMIKRTQVPFPEMQPPIRRRKRRSKEKNMQLVTYVPNGDETLPNSPSKGNYVFTPARGNVTPVILQPNGPPPNQPPPHLRATQGKPVHSVLPLAVYPPNGSTSQASESQTSSQFTGTGSENVSVKQHGTDGQQVEGGGKSSVGNQETVVKMETDIGDMNEPLFVEPLQTRHTVHHFQGAPVMGPVMHTGAGRMTELLQAVQQNLGDDRNGHPSASFVVNRNRDEETDEAGRL 353
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03494 353 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 343 IPR045881 -
Cien5g03494 353 MobiDBLite consensus disorder prediction 217 265 - -
Cien5g03494 353 MobiDBLite consensus disorder prediction 325 353 - -
Cien5g03494 353 MobiDBLite consensus disorder prediction 339 353 - -
Cien5g03494 353 MobiDBLite consensus disorder prediction 1 62 - -
Cien5g03494 353 MobiDBLite consensus disorder prediction 13 38 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03494 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1694829 Cien Cien5g03494 Cien-Chr5:80858255 Cien8g01320 Cien-Chr8:20962452