AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03525 ATGACAAAACAGAGCAACAAAACTTTTTTAAATGTCAATTCCTTAACAAATTTGAATTTGGTTGTTAGCATCTGTAATTGCCACATCCATAATATCCTCTTCTTCCCCAATCCGGAACTGCCTACTAATGTCAAATGCGCCGGCCGGACTTTACGGAGCTACCACGCTGCTAGAGATCATAGAGAATGTGCTGTTAGTTTCACCATAGCACCAAAACTGGCGAGAGAATCGATCATGTTGATTCACAATTGGAACTTTTCTCCAACTTCGTCCCGACTATTACAGACCACAAGTCGAAGCAATAGAATCGAATTCGAAACTACTCGAATCTACTCGAGAAGGAGAAAACTCAAAGTTTCTTCGACAATTGCGTCTCTGAAAGTTGGAACGGATGTAATCGCTGAAATTGCTCACAATAAGGTGCTGATAGCAGCAGCTGCCTGTGCTGCAGTTGGACAGCTGACAAAACCTTTCACAGCTTACATTTTATATCGTAGAGATTTTGATCCAAAAGTTGCACTTCAAGCTGGAGGGTTTCCTTCAACTCATTCATCTGCAGCTGTGGCTTCTGCAATGTCAATTGGTCTGGAAAGGGGTTTCTCGGATTCAATTTTTGGATTAGCTCTTGTCTATGCATGTCTTACCATGTATGATGCCCAGGGTGTTAGAAGGGAAGTGGGAGTTCACGCAAGAACATTAAACAAAGTATTAACCAAAAACCAATTTGAATCTTCATCCAAAAAACCCTTCTCAAATCCAGAATCCAGTAACTCTCAAAAGTTTGAGGAAACAAACAGTTGTAAGCATAAAGAGACAACACTTGTTCTAACATCCAATGAAAAAGAAGCAGAAATTGTTGCTCCTGTTTCTGATTTACTCAAAGAATCAATCGGTCACACTGAAATTGAAGTGGCTGCAGGTGCTTTGTTGGGTTTACTTGGGAGCTTAGCTGTCTACTCCTTATGA 966 40.68 MTKQSNKTFLNVNSLTNLNLVVSICNCHIHNILFFPNPELPTNVKCAGRTLRSYHAARDHRECAVSFTIAPKLARESIMLIHNWNFSPTSSRLLQTTSRSNRIEFETTRIYSRRRKLKVSSTIASLKVGTDVIAEIAHNKVLIAAAACAAVGQLTKPFTAYILYRRDFDPKVALQAGGFPSTHSSAAVASAMSIGLERGFSDSIFGLALVYACLTMYDAQGVRREVGVHARTLNKVLTKNQFESSSKKPFSNPESSNSQKFEETNSCKHKETTLVLTSNEKEAEIVAPVSDLLKESIGHTEIEVAAGALLGLLGSLAVYSL 321
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03525 321 MobiDBLite consensus disorder prediction 244 265 - -
Cien5g03525 321 MobiDBLite consensus disorder prediction 244 262 - -
Cien5g03525 321 Pfam Divergent PAP2 family 138 312 IPR003832 -
Cien5g03525 321 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 121 320 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03525 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr5:81174180 Cien7g00820 Cien-Chr7:10318189 dispersed
Cien Cien-Chr5:81174180 Cien6g00038 Cien-Chr6:455154 wgd