AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03533 ATGGCTTTCACAGTAATCCCCAATCTATCTCCTCCATCTTTCACTCGCCTCCATCTTCATCAATCCTCACAAAAATCCCCGTCTTCATCTTCATCGCATTCCGCAACTCCCCACAACCATGGCGGTGTTGGTCTACAATCATCCGTCGAATCGCCGCCGGTTCGTGTTCGCGTTTCTCCGCCGACCGATCCTCGCCAGGATTTCTACGTTAATCTCGGCTTAGCTGTTCGTACTCTCCGCCATGACTTGCCTCTGCTTTTCTCCACAGATCTAAATTACGAAATCTACAGAGACGATATCACCTTCGTTGATCCTCTAAACAAGTTCACCGGAATCGAAAACTACAAACTCATCTTCCGAGCATTACGTTTTCACGGTCGTATCCTATTCAAAGACATCTCGTTGGAGATTTTTAGGGTTTGGCAGCCATCAGAGAACCTAATTTTGATCCGATGGAACCTCAAGGGAACCCCTCGTGTCCCCTGGGAAGCTAAAGGCGAGTTCCAAGGTACTTCCCGTTACAAACTGGATCGAAATGGCAAAATCTACGAGCATAAAGTCGATAATCTAGCTTTCAATTTCCCACAACAGCTAAAACCTGCAGTATCAGTTCTAGATCTAGTAGCTGCTTGTCCTCCTGCCACACCTAACCCTACATTCTCATGGGCTACACTAGATTCTACCTACTCATCTTCATGGCTAGACTTCTATCGTGCAGTAAGGAACACATTGGATCCTAGCTATGATTATACAGGTTTACAAGATTGCCAACTAGTAGCGACTTGTTTATAG 792 45.83 MAFTVIPNLSPPSFTRLHLHQSSQKSPSSSSSHSATPHNHGGVGLQSSVESPPVRVRVSPPTDPRQDFYVNLGLAVRTLRHDLPLLFSTDLNYEIYRDDITFVDPLNKFTGIENYKLIFRALRFHGRILFKDISLEIFRVWQPSENLILIRWNLKGTPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAVSVLDLVAACPPATPNPTFSWATLDSTYSSSWLDFYRAVRNTLDPSYDYTGLQDCQLVATCL 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03533 263 Gene3D - 88 201 - -
Cien5g03533 263 MobiDBLite consensus disorder prediction 17 46 - -
Cien5g03533 263 MobiDBLite consensus disorder prediction 17 62 - -
Cien5g03533 263 SUPERFAMILY NTF2-like 90 186 IPR032710 -
Cien5g03533 263 PANTHER RIKEN CDNA 2310061I04 GENE 21 209 IPR018790 -
Cien5g03533 263 Pfam Uncharacterized conserved protein (DUF2358) 75 185 IPR018790 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03533 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr3:23260911 Cien5g03533 Cien-Chr5:81209396 dispersed
Cien Cien-Chr5:81209396 Cien7g00184 Cien-Chr7:2181512 dispersed