Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03534 | ATGGAGGAGCATCCCGGAGGTGGTGGTGCTACCGATCAGACTAGCAATGGGAAGATGGAGTATACAGAGCACCGATCTCCATCCACCGTTGATGTTAATGATTCTGGTGCGTGGAGACTCGACATCAATAATTTCCGGCTACCGGAAACATCCGCTGCGGACGATAAATCTTCAACTCTCCGCCGCCTGGTGTTCCCTACTCGAAGAACGAAGAGAAAAGTTAAAGCATATTATAAGAAACAAGAAAGCCTCTTTGAGGGGTTCAATGAGATGGAAACAATAGGCAAATCAGGTTCTTTACCAGGAGCTCTAACTGAGGATGAAATGGAAAATCTTGCTAAGAGCGAGCGAACGGCGATCTACGTATCCAACGTAGCTAACTTGATTCTGTTCATTGCTAAACTCTACGCCTCCATTGAGAGCAGATCGTTAGCAGTCATCGCATCAACTCTGGATTCGTTTTTGGATCTGTTATCTGGATTTATTCTATGGTTTACATCAAACGCCATGAGAAACCCTAATCGTTATCGCTATCCAATTGGGAAGAACCGGATGCAACCTGTCGGGATTATCGTTTTTGCATCGGTAATGGCAACTCTCGGTTTCCAAATACTGCTAGAATCTGCCAGAGAAATCCTAGCCGAGACACACCCTAGCAAGAACCATGGTGACGAAGAATGGGTGATTGGAATCATGGTTTCCGTTACCATAGTGAAATTTGTGCTGATGTTGTATTGCCGAAGATTTGAGAACGCAATAGTGAGAGCATACGCGCAGGATCATTTCTTCGATGTCATCACTAATTCCATTGGATTAGCAGCAACTGTCTTAGCCGTACGTTACGATTGGTGGATGGATCCCGTTGGCGCTATAATTATAGCGGTTTATACGATAAATACATGGACAAAGACTGTTATAGAGAACGTACGGTCTTTAATCGGGAGAACAGCTCCACCTGAATTCTTGTCGAAATTGATATACTTGGTATGGAACCACCATGAAGAAATACAACACATTGACACGGTTAGGGCATACACATTCGGGGGTTATTACTTTGTGGAGGTAGACATAGTGTTGCCACGAGATATGATGCTCATCGAGGCGCATAATATTGGTGAAATGTTACAAGAAAAACTAGAGCAATTGGCGGAAGTTGAACGAGCTTTTGTTCATATCGATTTTGAGTTCACTCATACACCCGAACATAAGGGAAAGAATATCCCCAGGACGGACGATCACAACCACCAGACAGACAGACCCACGTGTCTCCATTTACGTGAGGAAGATGATGAACACGCATACACACATTCTTCAACAACAATCGGCAACCCCATGTTCGTTTTACTGGATTAG | 1353 | 44.12 | MEEHPGGGGATDQTSNGKMEYTEHRSPSTVDVNDSGAWRLDINNFRLPETSAADDKSSTLRRLVFPTRRTKRKVKAYYKKQESLFEGFNEMETIGKSGSLPGALTEDEMENLAKSERTAIYVSNVANLILFIAKLYASIESRSLAVIASTLDSFLDLLSGFILWFTSNAMRNPNRYRYPIGKNRMQPVGIIVFASVMATLGFQILLESAREILAETHPSKNHGDEEWVIGIMVSVTIVKFVLMLYCRRFENAIVRAYAQDHFFDVITNSIGLAATVLAVRYDWWMDPVGAIIIAVYTINTWTKTVIENVRSLIGRTAPPEFLSKLIYLVWNHHEEIQHIDTVRAYTFGGYYFVEVDIVLPRDMMLIEAHNIGEMLQEKLEQLAEVERAFVHIDFEFTHTPEHKGKNIPRTDDHNHQTDRPTCLHLREEDDEHAYTHSSTTIGNPMFVLLD | 450 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03534 | 450 | SUPERFAMILY | Cation efflux protein transmembrane domain-like | 115 | 314 | IPR027469 | - | |
| Cien5g03534 | 450 | Gene3D | Cation efflux protein transmembrane domain | 117 | 312 | IPR027469 | - | |
| Cien5g03534 | 450 | Gene3D | Cation efflux protein, cytoplasmic domain | 317 | 394 | IPR036837 | - | |
| Cien5g03534 | 450 | Pfam | Cation efflux family | 121 | 313 | IPR002524 | GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cien5g03534 | 450 | MobiDBLite | consensus disorder prediction | 400 | 419 | - | - | |
| Cien5g03534 | 450 | SUPERFAMILY | Cation efflux protein cytoplasmic domain-like | 317 | 393 | IPR036837 | - | |
| Cien5g03534 | 450 | MobiDBLite | consensus disorder prediction | 9 | 32 | - | - | |
| Cien5g03534 | 450 | FunFam | Metal tolerance protein 11 | 315 | 395 | - | - | |
| Cien5g03534 | 450 | Pfam | Dimerisation domain of Zinc Transporter | 324 | 393 | IPR027470 | - | |
| Cien5g03534 | 450 | NCBIfam | cation diffusion facilitator family transporter | 118 | 393 | IPR002524 | GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cien5g03534 | 450 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Cien5g03534 | 450 | FunFam | Metal tolerance protein 11 | 119 | 312 | - | - | |
| Cien5g03534 | 450 | PANTHER | MITOCHONDRIAL METAL TRANSPORTER 1-RELATED | 56 | 403 | IPR050291 | GO:0008324(PANTHER)|GO:0016020(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03534 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:34205539 | Cien5g03534 | Cien-Chr5:81210298 | dispersed | |
| Cien | Cien-Chr5:81210298 | Cien9g01767 | Cien-Chr9:28299573 | dispersed | |
| Cien | Cien-Chr5:81210298 | Cien3g03569 | Cien-Chr3:91353750 | transposed |