Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cien5g03540	ATGAGTAGTTGGAGGAGTCTGATTTTGAGAATCGGCGAGAAGTCCCCTGAATACGGCGGAACAGTCGATTACAAAGACCACATTGATGCTTGCTTTGGTGCGGTTCGGCGGGAGCTTGAGCATTCCGAAGACGAAATATTGACTTTTCTTCTCCAATGTTCAGAGCAATTGCCTCACAAAATTCCTCTGTATGGGACGGTGATTGGGTTACTGAACTTGGAAAACGAGGACCTTGTCAAGAAGATATTGGAGACTACTCAAAAGAGTTTACAGGATGCTCTGGACTCTGGAGATTGCAACAAGATCCGTATATCAATGCGGTTTCTAACTGTCTTGATGTGCAGCAAAGTGGTTCAACCAAGTTCACTAGTGGTGGTTTTTGAAACACTATTATCTTGTGCTGCAACTATAGTGGATGATGAGAAAGGAAACCCATCATGGCAATCACGTGCTGATTTCTACATAACTTGCATTCTTTCATGTCTTCCATGGGGTGGATCAGAACTTGTTGAGCAAATTCCAGAAGAGGTTGAAAGAGTTATGGTTGGGATAGAAGCCTATTTAAGTATCAGAAGACGCGTTTCTGATGTTGGTCTATGTGTCTTTGATAATATTAACAAAGATAAACTTCATGATGAACAGGATTTTGTGGAAGACTTGTGGGGTCGAATCCAAGATCTTTCCAAGAACAGCTGGAAACTCGAGAGTGTTCCAAGGCCACATCTTTTATATGAAGCACAATTAGTTGCTGGAAAGTCTCATGATTTTGGATCCATCACTTGTCCTGAACTACCAGATACCCTTACATCACTAACTGGAGTCAATTTTGGTAGACAAAAACATGAGGCAGAATTGAAATACCCTCAAAGGATACGAAGGCTCAATATATTTTCTGCTAGTAAAACAGAGGATGTACAACCAATAGACCGCTTTGTTGTGGAAGAGTATTTATTGGATGTGCTCTTTTTTCTAAACGGATGTCGAAAGGAATGTGCTGCATGCATGGTTGGCTTACCAGTTCCTTTCAGATATGAATATCTCATGGCTGAAACAATTTTTTCACAGCTTCTTTTATTACCTCAGCCACCTTTCAAACCCATGTATTACACACTAGTGATCATAGACCTTTGTAAGTCTCTTCCAGGTGCCTTCCCTGCAGTTGTAGCAGGGGCAGTTCGTGCCCTTTTTGATAGAATAAGTGAGTTAGATATGGAGTGTAGGACCCGCCTCATACTTTGGTTCTCACACCATTTATCAAACTTTCAATTCATTTGGCCATGGGAAGAATGGGCATATGTCTTGGAACTTCCAAAATGGGCCCCACAACGTGTATTTGTCCAAGAGGTTCTCGATAGAGAAGTGCGCTTATCATACTGGGATAAAGTGAAACAGAGCATTGAAAGTACTCCAGCTTTAGAGGAATTACTACCTCCAAAAGGTGGGCCCGACTTCAGATACGCTTCAGAAGAAGAGGATAAAACAGAATATTCCCTTTCAGTAGAACTAAATGGCATGGTAAAAGGAAGAAAAACAGCACGTGATGTTATTATATGGCTTGAAGAAAGTGTGATTCCAGTGAATGGAGTGGAAGTTGCATTAAGAGTAGTTGTTGAGACACTATTGGACATTGGGTCAAAGAGTTTCACTCATTTGATTACTGTTTTGGAAAGATATGGACAAGTTATTGCCAAAATTTGTTCAGATGAAGAAACACAAATTATGTTGATATCAGAAGTGGGGTCATTTTGGAAGAATAGTGCTCAAACAACAGCTATAACAATTGATAGAATGATGGGTTATCGTCTTATTTCCAATTTAGCCATTGTTAAATGGGTCTTCTCTCAGTCAAACATTGACCTTTTTCACACCTCAGATCGTGTGTGGGAGATCCTGAGAAATGCGCTTAATAAAACGTACAACCGTATATCCGATTTAAGGAAAGAGATTAATAATTTAAAAAAGAATGTTGCAAAAGCTGAACAAAATGCAGCCAAGGCTAAAGCTGAGCTGGATGATGCGGAGACAAAACTTATGCTTGTAGATGGTGAGCCTGTTGTTGGTGAAAATCCCGCAAGAATGAAACGTTTGAAATCAAATGCTGCAAAAACAAAAGATGATGAGCTGGCAATTCGTGAATCTTTAGAGTCAAAAGAAGCTCTTTTTGCACGTGCCCTTGAAGAAAACGAGGCATTGTTTATGTCGATGTATAAAAATTTCTCAAATGTTTTGAATGAACGGCTTCATGAGAGTTTTGGAGAGAAAAGTTCTGGTGACAATGAAGCAATGGCTGTTGATGAAGAAGACAATCCTGCAATGGACATGGATAAAGAAAATGGCACTTCCAAGAGATATACTACAAGTGAGAAAGAGCAATGGTGTTTGTCAACTTTGGGTTATGTCAAGGCCTTTTCAAGGCAATATGCTTCTGAGATATGGCCACACATGGATAAGTTAGAGGAGGAAATAGTAACGGAAAATGTTCATCCTTTATTTAAGAAAGCGGTTTATTCTGGTTTGCGTGTACACATCGATCGTTGA	2538	39.91	MSSWRSLILRIGEKSPEYGGTVDYKDHIDACFGAVRRELEHSEDEILTFLLQCSEQLPHKIPLYGTVIGLLNLENEDLVKKILETTQKSLQDALDSGDCNKIRISMRFLTVLMCSKVVQPSSLVVVFETLLSCAATIVDDEKGNPSWQSRADFYITCILSCLPWGGSELVEQIPEEVERVMVGIEAYLSIRRRVSDVGLCVFDNINKDKLHDEQDFVEDLWGRIQDLSKNSWKLESVPRPHLLYEAQLVAGKSHDFGSITCPELPDTLTSLTGVNFGRQKHEAELKYPQRIRRLNIFSASKTEDVQPIDRFVVEEYLLDVLFFLNGCRKECAACMVGLPVPFRYEYLMAETIFSQLLLLPQPPFKPMYYTLVIIDLCKSLPGAFPAVVAGAVRALFDRISELDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVQEVLDREVRLSYWDKVKQSIESTPALEELLPPKGGPDFRYASEEEDKTEYSLSVELNGMVKGRKTARDVIIWLEESVIPVNGVEVALRVVVETLLDIGSKSFTHLITVLERYGQVIAKICSDEETQIMLISEVGSFWKNSAQTTAITIDRMMGYRLISNLAIVKWVFSQSNIDLFHTSDRVWEILRNALNKTYNRISDLRKEINNLKKNVAKAEQNAAKAKAELDDAETKLMLVDGEPVVGENPARMKRLKSNAAKTKDDELAIRESLESKEALFARALEENEALFMSMYKNFSNVLNERLHESFGEKSSGDNEAMAVDEEDNPAMDMDKENGTSKRYTTSEKEQWCLSTLGYVKAFSRQYASEIWPHMDKLEEEIVTENVHPLFKKAVYSGLRVHIDR	845

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cien5g03540	845	Pfam	MIF4G domain	24	222	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Cien5g03540	845	PANTHER	CAP BINDING PROTEIN	4	839	IPR027159	GO:0000184(PANTHER)\|GO:0000339(PANTHER)\|GO:0000339(InterPro)\|GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0005845(PANTHER)\|GO:0005846(PANTHER)\|GO:0005846(InterPro)\|GO:0006406(InterPro)
	Cien5g03540	845	FunFam	Nuclear cap-binding protein	295	480	-	-
	Cien5g03540	845	FunFam	Nuclear cap-binding protein subunit 1	3	268	-	-
	Cien5g03540	845	SMART	if4-15	1	228	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Cien5g03540	845	Pfam	MIF4G like	343	466	IPR015172	GO:0016070(InterPro)
	Cien5g03540	845	Gene3D	-	3	268	-	-
	Cien5g03540	845	Gene3D	-	488	837	-	-
	Cien5g03540	845	SUPERFAMILY	ARM repeat	2	295	IPR016024	-
	Cien5g03540	845	Pfam	MIF4G like	524	810	IPR015174	GO:0016070(InterPro)
	Cien5g03540	845	SUPERFAMILY	ARM repeat	292	477	IPR016024	-
	Cien5g03540	845	SUPERFAMILY	ARM repeat	481	835	IPR016024	-
	Cien5g03540	845	Coils	Coil	635	683	-	-
	Cien5g03540	845	Gene3D	-	294	480	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cien5g03540	K12882	nuclear cap-binding protein subunit 1