AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03548 ATGGTCACCGACGTAAATTATCTGTGTTCGGTAATGAACCAGCAGCAAGGGATAATGAATGATTCTAAATCAACGGCTCTTATTACTCGTGACTTGCTAGGAGGCGGTGGTGGTTGCGACCATGATTCCTCCAAAGAATTGGACCTCGAGCTACACGTTCCTCCCGGTTATGAAAAACGTCTTGACTTAAAGTCAGGGAAAGTTTATCTTCAGAGATGCAAATCACCAAACACATCTTCTTCATCATCGGATCAGAAACAATACGACAACGATCAAACAATTTCAAAGCTTCAGGACCTCAACTTCCCTCCCTCTTCAAAAAAAGCATTAAACCTCTTTGACGATTCAAGCTTAGATCTCAACCTTGTTAATTTATCATCATCACCACCGGCTTACAGAAGTGTTTGTACTCTCGACAAAGTAAAATTCGCACTTGAAAGAGCAGAAAGAGAAACATTCAAGAAACGATCGGTTTCAATTTCAAAGTCATGTTCATCTCCTACCTCCAATTCATCATCCTCCATTAAAGAAACAATGATTATAGATGATGATGATCATGATGAACGATCTTCTGAAGCTTATGCTGCTGGATGCCCTAGCTGCTTGCTATATGTGCTTATATCACGTAGCAACCCTAGATGTCCTCGTTGCAACATGACAGTTCCATCACCTACAGCCATGAAGAAACCACGAATCGATCTTAACATCTCCATATGA 717 40.86 MVTDVNYLCSVMNQQQGIMNDSKSTALITRDLLGGGGGCDHDSSKELDLELHVPPGYEKRLDLKSGKVYLQRCKSPNTSSSSSDQKQYDNDQTISKLQDLNFPPSSKKALNLFDDSSLDLNLVNLSSSPPAYRSVCTLDKVKFALERAERETFKKRSVSISKSCSSPTSNSSSSIKETMIIDDDDHDERSSEAYAAGCPSCLLYVLISRSNPRCPRCNMTVPSPTAMKKPRIDLNISI 238
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03548 238 PANTHER PUTATIVE-RELATED 51 236 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03548 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr1:20898190 Cien5g03548 Cien-Chr5:81355952 dispersed
Cien Cien-Chr5:81355952 Cien9g01773 Cien-Chr9:28533378 dispersed