AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03590 ATGTCGGCGTCCAAGCACTTGACAGTTGATACTAGTGTGCAATTGTGCATCGTCTGCATTTCCGTGATTCGAAAGAAAAAAACACACAGATACCAAATAAGGAAAGTATCTCTTAACTCATTGTTTATTCATACTCGATTTGAGGTTCTTCTTGAAGCAAAAGATCGAATACATGGTGTGTGCAGGCGGAAGATGAATACGATACCGCCAAATACGAGCATGGACGCGGCAAGGAAACAGTTCTTGAAGGAATTCGGTGAATCTTACGGTTATCCGGATGCTCCCAAGAATATCGATGACATCCGAGCTACTGAATTTAAAAGACTTGATGGAAGTGTGTACTTGGATCACGCTGGTGCAACTTTATATTCTGAATTACAGATGGAGGCAATATTTAAAGATCTTACCACCACTGTATACGGCAATCCTCATAGTCAAAGCAGCTCTAGCTTGACCTCATCAGACATTGTTGAAGATGCTCGTCATCAGGTTCTCAAAATCTGTAACGCGTCTCCAAAAGAGTACAAATGTATCTTCACTTCAGGGGCTACAGCAGCTCTTAAACTTGTTGGGGAAGCGTTTCCATGGAGCAATCAGAGCACTTTCATGTATACAATTGAGAACCACAACAGTGTTCTTGGGATCAGAGAATATGCTCTTAATCAAGGAGCTACAGCGTTAGCAATAGACTTTGAGGAAACTACACAATCTGACACATACAAGGTTTCACAGTATCCTCTACCAAAAAGAAGTGAAGCTAGGGTTTTGGAAAAAGAGCCTACTGATGCATACAATTTGTTTGCTTTTCCTACTGAGTGTAATTTCTCGGGAGTGAGGTTTAATCTTGATTTGATAGACATAATTAAGGAAGATTCAGAACGAATATTGGAAGGTTCTCAAAATTCCAGGGGATCCTGGATGGTTTTACTTGATGCTGCAAAAGGATGTTCTACAGAGCCTCCAGATTTATCAAAATATAAAGCAGACTTTGTTGTCATCTCATTTTACAAGCTTTTTGGCTATCCAACTGGACTTGGAGCTTTGATAGTTCAAAATGAAGCTGCAAAGTTACTAAAGAAGACGTACTTTAGTGGAGGGACAGTGGCTGCATCAATTGCTGATATTGACTTTGTGAAAAGAAGAGAAGGTATTGAGGAGTCATTTGAAGATGGAACATTATCATTTTTAAATATAGCATCAATTCGCCATGGATTTAATATTCTAAATACTTTGACCACATCAGCCATATCACGGCATACATTGTCACTTGCAAGATATACTAGAAATATGCTTTTGGCATTAAGGCATGCAAATGGTGAGAAGGTTTGCAAGATATACGGACTGCATTATTTAAAGAAAGTGTATAGTGGACTTGGTCCTGTAATATCTTTTAACTTGAAACGGCCTGATGGTTCTTGGGTTGGTCATCGTGAAGTGGAAAAATTGGCTTCTTTATCTGGAATTCAACTACGGACAGGATGCTTTTGTAATCCTGGTGCATGTGCCAAGTATCTTGGTTTATCTCATTCAGATCTTCTATCCAACATTGAGGCTGGACATGTATGTTGGGATGATTATGATATATTAAACGGGAAACCAACTGGAGCTGTTAGAGTATCTTTTGGATATATGTCAACATTTGAAGATACTTGGAAATTCATGAACTTCATTGTGAGTTCTTTTGTATTGTTGCCTACCAATAGTATCATACATCTTCCTTCATTGAGATCAACAGAAGGTTGTCTTTCACATCATCTTACATCAATTGTGGTGTATCCAATAAAGTCATGTTCAGGATTCAAAGTGGACAACTGGCCTCTTAGCAGTACTGGATTGTTATATGATCGCGAGTGGCTTCTCAAAAGCATGAATGGTGAAATTCTTACACAGAAAAAGGTACCTGAAATGTACTATATCAGCACAAAGATTGACCTCAAAACTGGATTACTTCATGTGGAATCTTCTAGATGCAAAGAGAAACTCTCTATTGCACTTAAATCTGATACTTTTTCTGTAGTAGAAGAAATCAATATACACGCCCAAAGGTATGAAGTTTTGGGGTATGATAACAAAATTGACGAATGGTTTAGCAAAGCGGTTGGGCGACCTTGTTATCTGTTAAGATCTAGTTCAAGAAGTTGTAACCGCTTTAACAGAAACATAAACATGCCCACATGTAGAGATGTAAATACCAGATTAAACTTTGTGAATGAAGCCCAGATTTTAATGGTGTCTGAAGAAAGCGTATCCGACCTCAATTCTAGACTAGATTCAGACCGGTTTGTTGATCCAATGAGATTCCGCCCTAATCTGGTCATATCTGGTGGTGGGCCGTATGTTGAAGACACATGGAATGGTCTTAAAATCGGAAAGAATCACTTCATGTCATTGGGCGGGTGCAACCGTTGCCGGATGATTAATTTAAATTATGAAGGAGGCGAGTTACAGAGATCAAATGAGCCTCTAGCTACTTTATCATCATACAGGAGGGAAAAGGGGAAAATACTCTTTGGAATTTTACTGAGATATGAGTGTGACAACCACGTTGGGGAAGAAATATCTTCATGGCTTCAAGTGGGTCAAGAAATACACCCTGATAAAAAGTAA 2607 38.9 MSASKHLTVDTSVQLCIVCISVIRKKKTHRYQIRKVSLNSLFIHTRFEVLLEAKDRIHGVCRRKMNTIPPNTSMDAARKQFLKEFGESYGYPDAPKNIDDIRATEFKRLDGSVYLDHAGATLYSELQMEAIFKDLTTTVYGNPHSQSSSSLTSSDIVEDARHQVLKICNASPKEYKCIFTSGATAALKLVGEAFPWSNQSTFMYTIENHNSVLGIREYALNQGATALAIDFEETTQSDTYKVSQYPLPKRSEARVLEKEPTDAYNLFAFPTECNFSGVRFNLDLIDIIKEDSERILEGSQNSRGSWMVLLDAAKGCSTEPPDLSKYKADFVVISFYKLFGYPTGLGALIVQNEAAKLLKKTYFSGGTVAASIADIDFVKRREGIEESFEDGTLSFLNIASIRHGFNILNTLTTSAISRHTLSLARYTRNMLLALRHANGEKVCKIYGLHYLKKVYSGLGPVISFNLKRPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDYDILNGKPTGAVRVSFGYMSTFEDTWKFMNFIVSSFVLLPTNSIIHLPSLRSTEGCLSHHLTSIVVYPIKSCSGFKVDNWPLSSTGLLYDREWLLKSMNGEILTQKKVPEMYYISTKIDLKTGLLHVESSRCKEKLSIALKSDTFSVVEEINIHAQRYEVLGYDNKIDEWFSKAVGRPCYLLRSSSRSCNRFNRNINMPTCRDVNTRLNFVNEAQILMVSEESVSDLNSRLDSDRFVDPMRFRPNLVISGGGPYVEDTWNGLKIGKNHFMSLGGCNRCRMINLNYEGGELQRSNEPLATLSSYRREKGKILFGILLRYECDNHVGEEISSWLQVGQEIHPDKK 868
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03590 868 SUPERFAMILY PK beta-barrel domain-like 731 820 IPR011037 -
Cien5g03590 868 ProSiteProfiles MOSC domain profile. 712 866 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Cien5g03590 868 SUPERFAMILY MOSC N-terminal domain-like 586 718 - -
Cien5g03590 868 SUPERFAMILY PLP-dependent transferases 102 558 IPR015424 -
Cien5g03590 868 Hamap Molybdenum cofactor sulfurase [MOCOS]. 88 865 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Cien5g03590 868 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 76 562 - -
Cien5g03590 868 Pfam Aminotransferase class-V 113 239 IPR000192 -
Cien5g03590 868 Pfam Aminotransferase class-V 306 549 IPR000192 -
Cien5g03590 868 Pfam MOSC domain 731 863 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Cien5g03590 868 Pfam MOSC N-terminal beta barrel domain 585 703 IPR005303 -
Cien5g03590 868 Gene3D - 128 410 IPR015421 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03590 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr5:16965692 Cien5g03590 Cien-Chr5:82228062 dispersed
Cien Cien-Chr5:82228062 Cien7g00193 Cien-Chr7:2237403 dispersed
Cien Cien-Chr5:82228062 Cien2g03062 Cien-Chr2:76434727 transposed