AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03603 ATGGCTGGCAATGGCCTACCAACCTTAGGCCGTGTGAAGCTCACAGACCTAATAGCTACCGAAGGCCTCCCTTCTGACACATACAAACTTTCAGTCTCAACTCTCTCACAATCCCTCGCTCAATATTCTGCTGCCATCATCCAATTCCCACCAACCGATGGTGCTCTCTTAAGATGTTGCCTTGAATCAGCTCGACCTTATTTCAATCAAAAGCCACCATATCCATCTTCAGACATGATTAACATTGATGACTCCCGTGAATGGTGCAAAACCTCTGGTTACTCAGCAGATCCTCAACTATGGCAAGAAAGTTATGATTACAGACCAGGATTAACTTCCACAGAACTCAACAACGACATTCAACTTCCACCTTCTGGATTGACAGATGTCTTTCTCCTACTTGGAAAAGCAGCACGTGACATACTCGATGCAATCAGCTTTTACTTGAATCTAAGAAGCTGTGCATTCACTGAAATACTCGACAGTGTTCCATTAAGAAACAGAGAGATATCATCTTCTGTGTTATCAGTTGGTTGTCACGCAAGGCCATCTTTTCAAGGAGCTCAACACCATAACTTAACAACTCAAGAAGATGGACAGATAGTTATGTTTACAGACCATGAACATCAAGTTGACAAAAGCCTTGTATCTATTATAAAGTCAGATAAAGCAGGTTTACATATAAGAGATTTTAATGGTCGTTGGGTGCTTGTAGATGGTGATCTTGGTCCACAAGAAGCAGTTATGTACCCTGGACTTGCTTTGTATCATGCTACTGCTGGATATGTTAGTCCAGCTCTTCATAGAACTGATGTTAATAGCTTACATGGTGGAATGTATGGAAGGTGTTCTGTTTCTTTTAAACTTATGCCTAAATCTATGACAAGTTTGAATTGTTCAGAGATGAGGGCTGCTGGTCATGGTGTTGAAGCTCAGTTTCAGATTCCGGTGTCAGTTGATGATTTTATGCAAAGATCGCATTCTTTGGATCAACTGTTTAACAGAAACAATTTTGCAAGTTTCAGTTTTCCTACAGTTCAAGAAGGATCTATAAAACCTTTAATGAAGAGAAAGAAGACCACCACAAGATGTAAACCTTTACCCCCTTCCAAAAGACTACGCCTTGAAGCCCAAAGAGTTCTTAAAGAAAGAGTTCAAGACATAGCTGATAAAAAGGGAATTAAACTCCGATTTTGCAGTTTGAAGGAATGCGAGTCTCACATCCACACACTCGACAGTCCATGTGGCAACATCCGATTGGAGATCGGGTGGCCCCCGGTTTGA 1284 41.36 MAGNGLPTLGRVKLTDLIATEGLPSDTYKLSVSTLSQSLAQYSAAIIQFPPTDGALLRCCLESARPYFNQKPPYPSSDMINIDDSREWCKTSGYSADPQLWQESYDYRPGLTSTELNNDIQLPPSGLTDVFLLLGKAARDILDAISFYLNLRSCAFTEILDSVPLRNREISSSVLSVGCHARPSFQGAQHHNLTTQEDGQIVMFTDHEHQVDKSLVSIIKSDKAGLHIRDFNGRWVLVDGDLGPQEAVMYPGLALYHATAGYVSPALHRTDVNSLHGGMYGRCSVSFKLMPKSMTSLNCSEMRAAGHGVEAQFQIPVSVDDFMQRSHSLDQLFNRNNFASFSFPTVQEGSIKPLMKRKKTTTRCKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCSLKECESHIHTLDSPCGNIRLEIGWPPV 427
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03603 427 SUPERFAMILY Clavaminate synthase-like 127 299 - -
Cien5g03603 427 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 426 - -
Cien5g03603 427 Gene3D - 18 329 IPR027443 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03603 - -