Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cien5g03610	ATGGAAAGATTGGGTGGTGGAGGTGATACTCAACAACTCGTTGATCGTCGGGATCCTAATCAACAACTTGGTTCGAATTCAACAGGTGGTACTGTATTTGATGCATCACAGTATGCATTCTTTGGTAACGAAGTCCTTGAAGAAGTTGAGTTGGGAGGTCTGGAAGATGAAGAAGAAGACATTCCAGCAGCTAAATTTGAGGACGAAGAGTATCAGCTGGAACAAGAAGAGGGCACGTTTCTGGGAATGGATGATCTTTCCACCACATTTTCAAAGCTCAACAAAGATGTCATGGGACCAAGTCTTGGAGTTTATGGTGACCGGGGATCTAGAGAAAATTCATCTGCAGCTGAGCGGGCACAGGGGGGAGAATTGACCAACTGGTTTGACCAGGATAATTTTTATACCGAAAATGCCCATGAAAGCAGCAGATGGTCATCAAATTCTTCATTTCCACCTCAAGACACATCAATGTTACACCACAGAACATCAAATCAATACCTTCACAGAACATCATCATACCCTGAACAACACCAACAACAAAACCCTAACAGCCACCTTCTAGAAGATTCCAAAAACCTCCACAGAACATCCTCATACCCCGATCAACAACAGCAACAAATCAGTCAACATTTGACTTTTCCCGACCCAAATCCCGTCCCCAAATCATCTTTCTTATCATACCCACCACCCGTTAACCCCCCATACCCACCATCTTTCTCCAATATCTCAAACCCACAGCTTCAAATAGGCGGGTTACCCCACCCACCCCATCCAACCCACCCGACCCACCCACCCCACGGGTCACAATTCGGTTCGAATCTGGGTCAATTTCGTCCACCCGCGAACCGGGTCCCGAACCAGTTTCAACCCGATCTTTCAAACGGTATGTTTGCTCACAAAAACGGTTTAATGCCACCCCAACAACACCGCCTACACCCTCAGTTCCAAGGGCATTTCGGTCATTTACCACTAATGAACCACCACCTCTCTCCTCCCCCACCGATGATCAACAACTTTGAACCGTTAGGGTTAGGCGGTCCACGAGACCAACGGGCCAGACCGGGCCCGAAAGTCAGACCACCGGGACCGCCGCGGTTCGATACCACGGGTTGGCCACAGTTCAAGTCCAAATACATGTCATCAGATGAAATCGAAAACATTTTAAGAATGCAACTTGCGGCTACACACAGTAACGATCCTTATGTAGACGATTACTACTACCAAGCTATTCTAGCAAACAAATCAAGTGGTGCGAAATTAAGACACCATTTTTGTCCCACGCTGTTGCGCAATTGTCCCTCGCGGGCCCGCCAAGCGAACGAACCGCACGCGTTTTTACAAGTGGACGCGTTGGGTCGGGTCTCGTTTTCCTCGATCCGACGCCCGCGCCCGCTTCTAGAAGTCGACCCGCCCAAATCATCCACCGGGCCCCACGACCAAAAAGCTTTAGATAAACCGTTAGAACAAGAGCCAATGCTCGCAGCTAGGGTTACAATAGAAGACGGGATTTGTCTTTTACTAGACGTCGATGATATCGATCGCTATCTACAGTTTAACCACCTCCAAGATAACGGGGGACATTTGAAACAAAGGCGACAAGTCCTTCTAGAAGGTTTGGCAACTTCACTACAGTTAGTCGACCCGTTAAAAAACGGAAACACGGTCGAGTTGTCCACCAAGGACGATTTAGTCTTTTTACGTTTGGTGTCGCTTCCGAAAGGACGAAAGCTTCTCGAACGTTACCTACAACATCTGTCGCCTGCGAGCGAGCTGACACGCGTCGTGTGCATGGCGATTTTCCGACATTTACGGTTTTTATTCGGGGGAGTCATGGCGGACCCCACGGTCGACAACCTCGCGAGGACGGTTTCGTCTTTTGTACGTAACATGGAGCTGAAGGCACTCGGCGCGTGTCTGGCTTCGGTGGTTTGTTCGACCGAGCACCCGCCGCTTCGCCCCGTTGGCAGTCCAGCTGGCGACGGGGCGTCTGTTGTTTTGAAAGCGGTACTCGAACGGGCGACCGAGCTTTTGACCGATCCGAATTCGGTCAACAATTGTAGCATGCAAAATCGTGCGTTTTGGCAGGCGTCTTTCGATGCGTTTTTCGGACTTTTAACCAAGTATTGTTTTAGTAAATACGATACAGTCGTCCAGACGTGGATGACACATGGCGGCGGCGGCGGTCCCGGCCCGTCTGACGTGGCGGCGATAAGTCGTGAAATGCCGGTTGAGCTTTTGCGTGCGAGTTTGCCACACACGAACGAAAGTCAAAGGAAGGTGTTGTTGGATTTTGCTCAAAGGTCAATGCCGGTCAACAATAGCGGGTGA	2331	49.76	MERLGGGGDTQQLVDRRDPNQQLGSNSTGGTVFDASQYAFFGNEVLEEVELGGLEDEEEDIPAAKFEDEEYQLEQEEGTFLGMDDLSTTFSKLNKDVMGPSLGVYGDRGSRENSSAAERAQGGELTNWFDQDNFYTENAHESSRWSSNSSFPPQDTSMLHHRTSNQYLHRTSSYPEQHQQQNPNSHLLEDSKNLHRTSSYPDQQQQQISQHLTFPDPNPVPKSSFLSYPPPVNPPYPPSFSNISNPQLQIGGLPHPPHPTHPTHPPHGSQFGSNLGQFRPPANRVPNQFQPDLSNGMFAHKNGLMPPQQHRLHPQFQGHFGHLPLMNHHLSPPPPMINNFEPLGLGGPRDQRARPGPKVRPPGPPRFDTTGWPQFKSKYMSSDEIENILRMQLAATHSNDPYVDDYYYQAILANKSSGAKLRHHFCPTLLRNCPSRARQANEPHAFLQVDALGRVSFSSIRRPRPLLEVDPPKSSTGPHDQKALDKPLEQEPMLAARVTIEDGICLLLDVDDIDRYLQFNHLQDNGGHLKQRRQVLLEGLATSLQLVDPLKNGNTVELSTKDDLVFLRLVSLPKGRKLLERYLQHLSPASELTRVVCMAIFRHLRFLFGGVMADPTVDNLARTVSSFVRNMELKALGACLASVVCSTEHPPLRPVGSPAGDGASVVLKAVLERATELLTDPNSVNNCSMQNRAFWQASFDAFFGLLTKYCFSKYDTVVQTWMTHGGGGGPGPSDVAAISREMPVELLRASLPHTNESQRKVLLDFAQRSMPVNNSG	776

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	196	270	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	1	31	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	222	241	-	-
	Cien5g03610	776	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	27	772	IPR039900	GO:0000290(InterPro)\|GO:0000290(PANTHER)\|GO:0000932(PANTHER)\|GO:0003723(PANTHER)\|GO:0033962(PANTHER)
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	14	31	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	345	371	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	105	129	-	-
	Cien5g03610	776	Pfam	Topoisomerase II-associated protein PAT1	451	593	IPR019167	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	139	158	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	115	129	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	463	486	-	-
	Cien5g03610	776	MobiDBLite	consensus disorder prediction	197	217	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cien5g03610	K12617	DNA topoisomerase 2-associated protein PAT1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cien	Cien-Chr3:6560825	Cien5g03610	Cien-Chr5:82538073	dispersed
	Cien	Cien-Chr5:82538073	Cien7g00989	Cien-Chr7:12137694	dispersed