Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03661 | ATGAATGGAGGCAATGAAGTCAGTGAAGAGAAATGGGCGAAGCATTACTCGTCGAATCACCAGATACTGTTGGTTGGAGAAGGAGATTTTTCTTTTTCTCTGAGCCTGGCTATGTCTTTTGGCTCCGCTTCGAATATTGTCGCTTCTTCTCTCGATTCTTACGATGATGTTATCAGGAAATACAAGAGAGCCAAAAAAAACTTGCAAAAATTACGCGATTTTGGAGCTCAATTGTTACATGGAGTCGATACCATCAAAATGAAGCTCCACACAGATCTTACAATGCGAAAGTTTGACCGGATTGTATATAATTTCCCTCATGCTGGCTTTTTAGGGAAGGAAAGTGATGAGATCGTCATCATGTCGCACAAAAGTTTGGTTCGTGGTTTCTTCAGAAATGCATGTAGCTTGTTGCGTCCAAACGGTGAAGTTCATGTAACCCACAAGACCGAACACCTGTTCCACCATTGGAATATAGAAGAACTAGCAACCCAATGTTGTTTAACATTAGTTGAAAGTGTGGAGTTCAAGATTGAAGATTATCCTGGCTACTACAACAAAAGAGGAGATGGTAGGAAGTCCGACCTTCCTTTTCCTCTAGGAAAATGCACTACTTTCAAATTCATATTGTCTTCAAAAGCCATGAAATCAACCACCTCACACCGTAAAAGACCTCAACATAATGGACCAGGTTCATTGGCTCGATCCTTAACTCCTGCCATGTCTGCTTTGCTGGAAGCAAGTAGACAGGCTGCTGTGGAGGATCAGGCAAAAAAGCTGTTGGCCGAAGAGGAAAAAAAGTTATTGAAAGTTAATTCGGAGTTGGAGGGTGTTCGTGGGAAACTTGTTGATTCAGAGGCGAAAATAGTTGAGCTTGAACGAGACAAGTTTGATTTACAGAAGAAACTGGATAACACGTGTAGCCAGCTGGAAGAGGTCAATGCCCGATTGGAAGAGAAAGGGAAAGAGGATGCCTCTGACGTGGCAGACTTAGAGTGGCTACTCCAGATAGGAATTTCTTCTATTGTATGCCGGTTACTGAAATCTGCTGACTTTAGTTGGGAGAATGCTATGATTCAAGGTGCTTTTGTCGATTTAGGGTACCAGAAGGGTTGTCGGGAAATGAGGGACAAGGTGGCTCCGGACATGGTGGACACTGAATTACCAGGGTTTGACCTGGATATTGAAAAGAATCTGAAAGTTGCGCAGTACGCTCTTGCGGAGCCGAAATTGAGTGTTATGGATTATTTGACTGGAAATGGCGTTACGGTCGCCAAGTTGAAGAAATGGTGCGAGGAGGATTTGGAGTTATCATCATCAGGTTTGGGTACGAGTCAGCCTTCTCATAATTAG | 1353 | 43.16 | MNGGNEVSEEKWAKHYSSNHQILLVGEGDFSFSLSLAMSFGSASNIVASSLDSYDDVIRKYKRAKKNLQKLRDFGAQLLHGVDTIKMKLHTDLTMRKFDRIVYNFPHAGFLGKESDEIVIMSHKSLVRGFFRNACSLLRPNGEVHVTHKTEHLFHHWNIEELATQCCLTLVESVEFKIEDYPGYYNKRGDGRKSDLPFPLGKCTTFKFILSSKAMKSTTSHRKRPQHNGPGSLARSLTPAMSALLEASRQAAVEDQAKKLLAEEEKKLLKVNSELEGVRGKLVDSEAKIVELERDKFDLQKKLDNTCSQLEEVNARLEEKGKEDASDVADLEWLLQIGISSIVCRLLKSADFSWENAMIQGAFVDLGYQKGCREMRDKVAPDMVDTELPGFDLDIEKNLKVAQYALAEPKLSVMDYLTGNGVTVAKLKKWCEEDLELSSSGLGTSQPSHN | 450 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03661 | 450 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 7 | 188 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Cien5g03661 | 450 | FunFam | Os09g0479300 protein | 20 | 171 | - | - | |
| Cien5g03661 | 450 | Coils | Coil | 254 | 323 | - | - | |
| Cien5g03661 | 450 | Coils | Coil | 51 | 71 | - | - | |
| Cien5g03661 | 450 | Gene3D | Vaccinia Virus protein VP39 | 14 | 178 | IPR029063 | - | |
| Cien5g03661 | 450 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 61 | 176 | IPR029063 | - | |
| Cien5g03661 | 450 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 23 | 188 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03661 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:83099846 | Cien5g03663 | Cien-Chr5:83108528 | dispersed | |
| Cien | Cien-Chr5:83088921 | Cien5g03661 | Cien-Chr5:83099846 | tandem | |
| Cien | Cien-Chr5:83099846 | Cien5g03662 | Cien-Chr5:83103114 | tandem |