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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien7g02542 ATGGAAATGCAAAACGACTTCGATCGCCTTCTCTTCTTTGAGCATGCTCGCCGGAGTGCCGAAGTGACTTACGCGAAAAATCCTCTCGATACGGAGAACCTAACCAGATGGGGAGGGGCGTTGCTCGAATTGTCGACCTTCCAGAGTGTTCAGGAATCAAAATCCATGATTAAAGATGCTATATCAAAATTGGATGAAGCTTTATCAATCGATCCAAGGAAACATGACGCCTTGTGGTGTATGGGCAATGCACAAACTTCTTACGCTTTTCTGACTCCCGATAAAGATGTAGCCAAGGGCTATTTTGACTCCGCTTATACTTACTTTCAGCAAGCTCTCGAAGAGGATCCAGGGAATGAACTTTACCGCAAATCATTTGAAGTTGCTACAAAGGCTCCTGAATTACACTCAGATCTTCATAAACAAGCTTCTAGTCAACAAGCCATGGCATCAGGGTCAATAGGAGGTCCTTCAACTTCTTCAAGTGTCAGGGGTCCAAAAGCGCAAAAGAGTAGTGATTTAAAATATGATATATTTGGATGGGTTATTCTTGCGGTTACTATTGTGGCTTGGGTTGGATTTGCTAAATCAAATGTACCTTCACCACCTTCTCGATAA 618 43.04 MEMQNDFDRLLFFEHARRSAEVTYAKNPLDTENLTRWGGALLELSTFQSVQESKSMIKDAISKLDEALSIDPRKHDALWCMGNAQTSYAFLTPDKDVAKGYFDSAYTYFQQALEEDPGNELYRKSFEVATKAPELHSDLHKQASSQQAMASGSIGGPSTSSSVRGPKAQKSSDLKYDIFGWVILAVTIVAWVGFAKSNVPSPPSR 205
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien7g02542 205 MobiDBLite consensus disorder prediction 138 168 - -
Cien7g02542 205 Pfam Plant specific mitochondrial import receptor subunit TOM20 7 196 - -
Cien7g02542 205 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 204 IPR010547 GO:0005742(InterPro)|GO:0045040(InterPro)
Cien7g02542 205 SUPERFAMILY TPR-like 13 123 IPR011990 GO:0005515(InterPro)
Cien7g02542 205 Gene3D Tetratricopeptide repeat domain 1 150 IPR011990 GO:0005515(InterPro)
Cien7g02542 205 MobiDBLite consensus disorder prediction 139 168 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien7g02542 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
65285 Cien2g02762 Cien7g02542
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr7:38801886 Cien8g00042 Cien-Chr8:1244970 dispersed
Cien Cien-Chr6:29605968 Cien7g02542 Cien-Chr7:38801886 transposed
Cien Cien-Chr2:73570416 Cien7g02542 Cien-Chr7:38801886 wgd
Cien Cien-Chr7:10457643 Cien7g02542 Cien-Chr7:38801886 wgd