AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien7g02588 | ATGGAAGATCAAGATCTACCACCGCCGGACGCCGCAATCGAAAACGCCGATCAGAATGAACAAGTCGTCGAGGAGCCAACACCGGTTGCTTCCCGAGTTGATATACTTTCCCAAGAGATTGACCGATTCATTTCTGTATTAGATGCCGATGATCAATCCGACTCATCGTCGCCGCCTGAAATCGTTGGTTCCGTTCATATTTTCGCGGATCTTTTGGATTTCAAGGTCGTTGAATACGAATCCGGTTCCAAGAAATGGATCGAGCTAGAAGAGGATGAATGTTCTTCTTTTGTAGAATCGATTGATCGAACAGCAAAGCTTCTCAAGTCTCTGTCTAGGTTTCATTCCGCAGATTATTACCCCTCTGTAATCAACCGGATTAGCGAAGTCCAACAACGTGCAATGTCTTTCATGGAGGATGAATTCAAGTCGCTTCTCGATGATTATCAAACTTCATACGATCGAGATCAAAGGAACGAAACTGATGAAGCCAAAACGCCTTCTCCTAGCAATGTTGACGAGGCATCAGAAACAGAATTGCCGGATCAATCCGAATCTCAGCCGGAGAAAGATGAGTTTCTAGGATATTCCGGCGAGATGACAACAAAGCTGCATAAATTAGCCGAGGGCTTGATAGCAGGAGGTCACAAAAACGAGTGTACCGAATTGTATTTCGTTGTTCGAAGAAACGCAATGGAACAAAACTTGAAGCATTTACAGTTTGAAAAATATTCCATCGACGAAATGCAGAAGATGCAGTGGGATCCAATAGAGAAAGAGGTTTCCGCATGGATAAAAATCTTCAAAGACTTCGCCACCTCGCTCCTCCCTAGCGAGCGGCGGTTAGTTGACGCCGTTTTCTCGGAAAACCACACAGAAATCTCCGACAGCCTATTTGGCAACCTAGCACGAATTGTCATATTTTACTTGCTAACGTTTGCGGAAGCGGTCATGATGACGAAACGATCCGCCGAGAAACTGTTCAAGTTTCTCGACATATACGAGACCTTACGAGACAGCATCCCGGAGGTGGAGAAATTGCTTTCCGGCGACTGGTTATTCCAGCTCAAAACCGCTGCATCATTGATCAGTACGATGCTAGGGGAAGCTATTTTCAACATTCTCGGAGACCTTGAGAACTCGATCCAAGCAGATTCAGGGAAGACACCGGTTCCCGGCGGAGACGTACACCCGTTAACTTGCTACACCATGAAGTATCTCAAACACGCATGTGAGTACAGGGACACATTGGAGCAAGTATTCAGAGAGCATAAAAAGATAGATCGACCCGACTCAGCCACCGGCTCCGATAACGATCCCGATCAGGATCCTAGTTCCGAAGACCAATCAGGCTATCAGGCGGGACCTGGATCGGCGTTCCAGTTACAGTTAGCGAAAGTGATGGATCTATTAGACGCGAACCTTGAAACGAAATCAAGACTCTACAAAGATCCATCATTGAGCTTGATCTTCATGATGAACAACGGCCGGTATATATTACAGAAGACAAAGGGAACCGGAGAAATGAGGAGCATAATGGGGGATCCATGGGTGAGGAAACGATCATCGGATCTAAGAAGTTACCACACGAACTACAAAAGAGAAACATGGACGAAACTGTTACAGTGTTTGAGTCATGAAGGATTGAGCGTTAACGGGAAGGTGATGAAGCCGGTACTGAAAGAAAGATTCAAGAGCTTCAACGCCATGTTCGATGAAATACACAGAACGCAAACGACATGGGTGGTGAGCGACGACCAACTTCAATCGGAACTAAGGGTGTCGATATCAGCGATTGTTATTCCGGCGTATAGGTCGTTCATGGGGAGGTTCAGTCAGATTTTTACTCCGGGAAGGCAAACGGAGAAGTATATAAAGTATCAACCGGAAGATATAGAAACATGCATTGAAGAGCTGTTTGATGCGAGTTCAAATCAAGGAGGAAAGAAGAGATAA | 1956 | 45.6 | MEDQDLPPPDAAIENADQNEQVVEEPTPVASRVDILSQEIDRFISVLDADDQSDSSSPPEIVGSVHIFADLLDFKVVEYESGSKKWIELEEDECSSFVESIDRTAKLLKSLSRFHSADYYPSVINRISEVQQRAMSFMEDEFKSLLDDYQTSYDRDQRNETDEAKTPSPSNVDEASETELPDQSESQPEKDEFLGYSGEMTTKLHKLAEGLIAGGHKNECTELYFVVRRNAMEQNLKHLQFEKYSIDEMQKMQWDPIEKEVSAWIKIFKDFATSLLPSERRLVDAVFSENHTEISDSLFGNLARIVIFYLLTFAEAVMMTKRSAEKLFKFLDIYETLRDSIPEVEKLLSGDWLFQLKTAASLISTMLGEAIFNILGDLENSIQADSGKTPVPGGDVHPLTCYTMKYLKHACEYRDTLEQVFREHKKIDRPDSATGSDNDPDQDPSSEDQSGYQAGPGSAFQLQLAKVMDLLDANLETKSRLYKDPSLSLIFMMNNGRYILQKTKGTGEMRSIMGDPWVRKRSSDLRSYHTNYKRETWTKLLQCLSHEGLSVNGKVMKPVLKERFKSFNAMFDEIHRTQTTWVVSDDQLQSELRVSISAIVIPAYRSFMGRFSQIFTPGRQTEKYIKYQPEDIETCIEELFDASSNQGGKKR | 651 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien7g02588 | 651 | MobiDBLite | consensus disorder prediction | 154 | 191 | - | - | |
| Cien7g02588 | 651 | MobiDBLite | consensus disorder prediction | 425 | 455 | - | - | |
| Cien7g02588 | 651 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 88 | 642 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
| Cien7g02588 | 651 | SUPERFAMILY | Cullin repeat-like | 88 | 641 | IPR016159 | - | |
| Cien7g02588 | 651 | MobiDBLite | consensus disorder prediction | 437 | 455 | - | - | |
| Cien7g02588 | 651 | Gene3D | Exocyst complex component Exo70 | 74 | 649 | - | - | |
| Cien7g02588 | 651 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Cien7g02588 | 651 | Pfam | Exo70 exocyst complex subunit C-terminal | 263 | 638 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Cien7g02588 | 651 | Pfam | Exocyst complex component Exo70 N-terminal | 91 | 147 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien7g02588 | K07195 | exocyst complex component 7 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr7:40101963 | Cien8g00020 | Cien-Chr8:626301 | dispersed | |
| Cien | Cien-Chr7:40101963 | Cien1g04009 | Cien-Chr1:99340287 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cien8g00020 | ACH | 72 | 653 | EXO70 exocyst subunit family | AT5G13150 | 46.644 | 2.61e-172 | 504.0 | |
| Cien8g00802 | . | 556 | 621 | EXO70 exocyst subunit family | AT5G13150 | 53.03 | 2.09e-16 | 73.6 | |
| Cien8g01979 | . | 24 | 682 | EXO70 exocyst subunit family | AT5G50380 | 57.973 | 0.0 | 737.0 | |
| Cien8g03096 | ACH | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 46.434 | 0.0 | 561.0 | |
| Cien7g01100 | . | 307 | 369 | EXO70 exocyst subunit family | AT3G09520 | 50.794 | 1.43e-11 | 58.9 | |
| Cien7g02225 | ACH | 5 | 658 | EXO70 exocyst subunit family | AT3G29400 | 46.747 | 0.0 | 543.0 | |
| Cien7g02588 | . | 56 | 684 | EXO70 exocyst subunit family | AT5G13990 | 45.688 | 0.0 | 552.0 | |
| Cien6g01144 | . | 6 | 678 | EXO70 exocyst subunit family | AT4G31540 | 70.431 | 0.0 | 982.0 | |
| Cien5g01416 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 62.461 | 0.0 | 781.0 | |
| Cien5g03155 | . | 108 | 161 | EXO70 exocyst subunit family | AT3G09520 | 57.407 | 3.30e-10 | 53.1 | |
| Cien4g02216 | ACH | 23 | 633 | EXO70 exocyst subunit family | AT1G72470 | 66.25 | 0.0 | 821.0 | |
| Cien4g02739 | . | 12 | 636 | EXO70 exocyst subunit family | AT4G31540 | 28.418 | 9.68e-80 | 266.0 | |
| Cien3g02180 | ACH | 72 | 644 | EXO70 exocyst subunit family | AT5G13150 | 41.766 | 1.67e-151 | 451.0 | |
| Cien3g03382 | . | 7 | 638 | EXO70 exocyst subunit family | AT5G03540 | 78.65 | 0.0 | 1005.0 | |
| Cien3g03518 | . | 325 | 423 | EXO70 exocyst subunit family | AT5G58430 | 74.747 | 1.17e-45 | 154.0 | |
| Cien2g02131 | . | 10 | 612 | EXO70 exocyst subunit family | AT2G39380 | 46.053 | 2.40e-170 | 499.0 | |
| Cien2g02280 | . | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 52.749 | 0.0 | 603.0 | |
| Cien2g02281 | . | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 52.749 | 0.0 | 599.0 | |
| Cien2g02283 | . | 304 | 608 | EXO70 exocyst subunit family | AT3G09520 | 48.197 | 7.08e-85 | 273.0 | |
| Cien2g03347 | . | 12 | 677 | EXO70 exocyst subunit family | AT4G31540 | 41.778 | 4.57e-174 | 509.0 | |
| Cien2g03428 | ACH | 23 | 633 | EXO70 exocyst subunit family | AT1G72470 | 65.19 | 0.0 | 799.0 | |
| Cien1g00831 | . | 7 | 631 | EXO70 exocyst subunit family | AT5G52340 | 70.813 | 0.0 | 935.0 | |
| Cien1g01291 | . | 187 | 221 | EXO70 exocyst subunit family | AT5G52340 | 60.0 | 1.96e-08 | 50.1 | |
| Cien1g01610 | . | 342 | 512 | EXO70 exocyst subunit family | AT2G39380 | 44.767 | 7.73e-39 | 139.0 | |
| Cien1g02611 | ACH | 25 | 633 | EXO70 exocyst subunit family | AT1G72470 | 65.971 | 0.0 | 795.0 | |
| Cien1g03845 | ACH | 13 | 611 | EXO70 exocyst subunit family | AT2G39380 | 48.52 | 0.0 | 564.0 | |
| Cien1g04009 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 62.145 | 0.0 | 765.0 |