AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien7g02595 ATGGCGGTCAAGACGGCGGTGCAGTTCTCCGACGTGCCACTTCTCGATCAGGTCAACGACAACGTCGCCTCGTTGTCTCTTTACGCCACTCGGCTTCCCACCGCCGCATTGGAAGTAAACAATGCCCGGAAAAGTGTACCTAAATTCATGGTGGTCGGTCACAGAGGTCATGGCATGAACGTCTCGACGGATAAGAGAATGAATGTTTTTAAAGAAAATTCCATTATTTCATTCAATAACGCTGCCAATTATCCTCTCGATTTCATCGAATTCGACGTTCAGGTGACAAAAGACGACATACCAATCATTTTCCACGACAATTTCATCTTCACCAAAGAGAATGGTGTCGTAGTTGAAAAAAGGGTCACCGATCTGACACTTAACGAGTTCTTCAGCTATGGTCCTCAAAGAGTAGCTGGTGTTGTCGGTAAAACTTTGTTTCGTGAATCAAACGGACAAATAGTCGGGTGGAACGTTGAGACCGATGATCATCATTGCACTTTACAAGAAGCTTTCGAAAAAGTAAACCCTGGTTTGGGATTCAACATCGAGTTGAAGTTCGATGATTACATTGTTTACGAACAAGAGTATCTCATCCATACTCTTCAAGTCATCATGAAGGTGGTATACGAATACGCCAAAGGAAGACCTGTAATGTTCTCAAGCTTCCAACCCGATGTCGCCTTGATCATGAAGAAACTTCAAATTGCATACCCAGTTTACTTCTTGACAAACGGAGGAACCGAGATATTTGACGATGTTCGAATGAATTCATTAGAAGACGCCAAGAAGCTCGCCATTGCTGGTGGACTAGATGGAATTGTTACGGATGTAGTTGGTATTTTCAAAAGCCCTACGGTCGTAAGAGAGATCAAAGAATCAAATCTTTCCCTCTTGACATACGGCAGATTGAATAATATCCCTGAAGCCGTTCATGTTCAATACCTAATGGGCGTAGAGGGCGTAATCGTCGATTTAGTTCAAGAAATCACGACTTCGGTTGCAAATATCAAGACGACGAAAGCATACAGCGAGAGTGAAAAGAAAAAGTTGCGAATTGAAGAACAGGAAGTTGGATTAGAAGTGAAGGAGATCACCGAAAAGATCGAATTGGCGTTTCTATTGAACTTGATTTCAAAAGTGCTTGAACATTGA 1155 42.6 MAVKTAVQFSDVPLLDQVNDNVASLSLYATRLPTAALEVNNARKSVPKFMVVGHRGHGMNVSTDKRMNVFKENSIISFNNAANYPLDFIEFDVQVTKDDIPIIFHDNFIFTKENGVVVEKRVTDLTLNEFFSYGPQRVAGVVGKTLFRESNGQIVGWNVETDDHHCTLQEAFEKVNPGLGFNIELKFDDYIVYEQEYLIHTLQVIMKVVYEYAKGRPVMFSSFQPDVALIMKKLQIAYPVYFLTNGGTEIFDDVRMNSLEDAKKLAIAGGLDGIVTDVVGIFKSPTVVREIKESNLSLLTYGRLNNIPEAVHVQYLMGVEGVIVDLVQEITTSVANIKTTKAYSESEKKKLRIEEQEVGLEVKEITEKIELAFLLNLISKVLEH 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien7g02595 384 Gene3D Phosphatidylinositol (PI) phosphodiesterase 37 334 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cien7g02595 384 ProSiteProfiles GP-PDE domain profile. 49 334 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cien7g02595 384 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 36 339 IPR051578 GO:0046475(PANTHER)
Cien7g02595 384 SUPERFAMILY PLC-like phosphodiesterases 47 328 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cien7g02595 384 FunFam Glycerophosphodiester phosphodiesterase GDPD2 40 336 - -
Cien7g02595 384 Pfam Glycerophosphoryl diester phosphodiesterase family 54 327 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien7g02595 K18696 glycerophosphodiester phosphodiesterase [EC:3.1.4.46]
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Event-related genes

Select Gene_1 Gene_2 Event_name
65277 Cien2g02735 Cien7g02595
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr2:73355459 Cien7g02595 Cien-Chr7:40181865 wgd
Cien Cien-Chr7:10852007 Cien7g02595 Cien-Chr7:40181865 wgd