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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien7g02605 ATGGCCAAGTTCACCGTCATGGATTCTCTCCTCTCCTTTGCTCTCCTCTTCTTGGTGGTATCGTCGGTAAATGCCGGATCGGACGCTCCGTTCATCGTAGCTCACAAAAAAGCCACACTCAGTAGGCGCAACCCCGGCGCCGAAAAACTCTCAGTTTCCATCAACATTTATAACCAAGGATCTGCGTACGCAATCACCTCCTTCTCTATTCTTCCTTTACATCTACCTCTGATTTTTCGATCCACAGTTTCGATTCATAATCTGCGTCTGCATGCATGTCGTTCAAGGGAGCCTCGTTTAATGGCTGCATATGATGTTAGCCTGACCGATGATGGCTGGTCTCCTGAATTATTCAGCATCATCTCAGGGAACACTTCAACCTCTTGGGAAAGACTCGATGTTGGTGCGGTTCTATCACACTCATTTGAATTGGAGTCAACAGTGAAATCTGTCTTTTATGGCACACCGGCTGTTATTACATTCCGTGTCCCCACAAAGGCTGCATTACAGGAGGCATATTCGACCTCAATTCTACCTCTTGAGATTCTATCTGATAAACCACGGGCAAGTGCATTTGGTCTTAGGTTGTTGGGCAAATATGGCAACTTAGTATCCGTAATCTCCATTGTGGTTTTATTTGTGTACATGCTCGTAACCCCACCTAAGTCCAATCCTTCAAAGGGAAGTAGAAAGAGGCGTTGA 702 45.87 MAKFTVMDSLLSFALLFLVVSSVNAGSDAPFIVAHKKATLSRRNPGAEKLSVSINIYNQGSAYAITSFSILPLHLPLIFRSTVSIHNLRLHACRSREPRLMAAYDVSLTDDGWSPELFSIISGNTSTSWERLDVGAVLSHSFELESTVKSVFYGTPAVITFRVPTKAALQEAYSTSILPLEILSDKPRASAFGLRLLGKYGNLVSVISIVVLFVYMLVTPPKSNPSKGSRKRR 233
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien7g02605 233 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 9 64 - GO:0005783(PANTHER)
Cien7g02605 233 Pfam Translocon-associated protein beta (TRAPB) 16 65 - -
Cien7g02605 233 Pfam Translocon-associated protein beta (TRAPB) 102 228 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien7g02605 K13250 translocon-associated protein subunit beta
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr7:40249337 Cien7g02605 Cien-Chr7:40327121 proximal