Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind2g04060	ATGGCGGCAAGTGTGGAGCGTGGTGGACAACCGAGTGATGGTATTAGTGGTGATGCTGTGGTGACTCTTGATCAAGTACCTAGATGGAGTGATGGTGATTTTAGATATTCGTATGAAATTGAAGATCCTAATTTTCCTAATATACATTTGTCTGATCCGTTAACGTCGTCTTCTGGTGCGGAAAGTAGTGGCAAAGTTTCAAGGTTTCCGGTTGATCATGAAGTTAATTCTAAGATTTATCTTTGGAGAGGGAATCCGTGGAATCTTGAGGTGGATGCTGTTGTCAATTCTACAAATGAGAACTTGGATGAAGCACATTGTAGTCCTGGTTTGCATGCTGCGGCTGGGCCTGGTCTTGCTGAAGAATGTGCGACATTGGGTGGCTGCAGAACAGGGATGGCAAAAGTTACGAATGCATATGATCTTCCTGCAAGGAGGGTTATACACACAGTCGGACCTAAGTATGCTGTAAAGTATCATACTGCAGCAGAAAATGCTTTGAGTCACTGTTATCGTTCTTGTCTGGAACTCCTCATTGAGAGTGGACTTCAAAGCATTGCTATGGGTTGTATATACACAGAGGCAAAAAATTACCCACGGGAACCCGCAGCCCATGTGGCAATAAGAACTGTCCGCCGGTTTCTTGAGAAACAAAAGGACAAAATTGCAGCTGTGGTCTTTTGCTTGACGACAGCCAATGACACTGAAATATATAAGAGACTGCTTCCGCTCTACTTTCCCCGTGATAAAAAGGAGGAAGAGATTTCTATTTCTAAGCTTCCTGCTGATGTTGGCGATGAAAATGGTGAAACAGTTATCGATGAACGAAAAATTAGAATAAAACCCTTACCCAATGTCAAGAAGACTATTCCTAAACCACCTCGAGCATCACTAGATGTTCCTGTCGGTGATCAAGGATTGCCTAGACGGAACTCTTCATATTTGGAGTCATATTTGGATCCTGCTTTCATGTCCATAATTAAAGATCCTGATCAGCGACGCCAGGAACAATGGGAAAAGACCGCCCGAGCACAAAACGGATTCAACTTTGCTAAGTTGCTAGGGTTTGGTGATCTTGGGGGTGCAACACTTTCTGCTGCCGAAGAATACTCGCTCCATTCTAGATACCTCGCCAAAGCAAATACTCTTAATCTTTCTGAAATAGCAGAAATGAAGATTCTGTACCGGGGAGGAGTAGACAGTGAAGGTCGTCCAGTAATGGTTGTAGTAGGAGCACATTTTCTCCTTCGTTGTCTCGATCTTGAAAGATTTGTTCTTTATGTAGTAAAGGAGTTTGAACCTTTGATCCAAAAACCTTATAGCATTGTTTACTTTCACTCTGCTGCATCTTTACAAGTGCAGCCAGATTTAGGATTTATGAGGAGATTGCAGCAAATACTTGGCAGGAAAAGCCAGCGGAATCTTCATGCGATATACATCCTCCACCCGACCTTTGGACTAAAGACTGCTATACTTGCATTGCAATTATTAGTGGATGGCATGGTGTGGAAAAAGGTTGTATATGTTGATCGACTTCTTCAACTTTTTAGATACGTTCCTCGTGAGCAGCTAACCATCCCCGACTTTGTATTCCAGCATGACTTGGAAGTGAATGGAGGAAAAGGCCTAATCGTGGATCCAAGAACAAAATATGTATATCAACGACCTTAG	1671	42.85	MAASVERGGQPSDGISGDAVVTLDQVPRWSDGDFRYSYEIEDPNFPNIHLSDPLTSSSGAESSGKVSRFPVDHEVNSKIYLWRGNPWNLEVDAVVNSTNENLDEAHCSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIESGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKIAAVVFCLTTANDTEIYKRLLPLYFPRDKKEEEISISKLPADVGDENGETVIDERKIRIKPLPNVKKTIPKPPRASLDVPVGDQGLPRRNSSYLESYLDPAFMSIIKDPDQRRQEQWEKTARAQNGFNFAKLLGFGDLGGATLSAAEEYSLHSRYLAKANTLNLSEIAEMKILYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQVQPDLGFMRRLQQILGRKSQRNLHAIYILHPTFGLKTAILALQLLVDGMVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYQRP	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind2g04060	556	ProSiteProfiles	CRAL-TRIO lipid binding domain profile.	381	530	IPR001251	-
	Cind2g04060	556	PANTHER	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	21	280	-	-
	Cind2g04060	556	SMART	sec14-4	387	533	IPR001251	-
	Cind2g04060	556	Pfam	Macro domain	95	207	IPR002589	-
	Cind2g04060	556	ProSiteProfiles	Macro domain profile.	66	246	IPR002589	-
	Cind2g04060	556	Gene3D	-	386	537	IPR036865	-
	Cind2g04060	556	SUPERFAMILY	Macro domain-like	65	275	IPR043472	-
	Cind2g04060	556	Gene3D	Leucine Aminopeptidase, subunit E, domain 1	16	251	IPR043472	-
	Cind2g04060	556	Pfam	Divergent CRAL-TRIO domain	403	534	IPR001251	-
	Cind2g04060	556	SUPERFAMILY	CRAL-TRIO domain	385	524	IPR036865	-
	Cind2g04060	556	CDD	SEC14	391	527	IPR001251	-
	Cind2g04060	556	SMART	YBR022w-8	78	207	IPR002589	-
	Cind2g04060	556	CDD	Macro-GDAP2-like	77	245	IPR035793	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind2g04060	K24997	ganglioside-induced differentiation-associated protein 2

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr2:115548655	Cind7g02913	Cind-Chr7:123722009	dispersed
	Cind	Cind-Chr4:261063646	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr5:219402570	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr5:146826566	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr6:180692544	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr7:140698862	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr9:94042712	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr3:354631822	Cind2g04060	Cind-Chr2:115548655	transposed
	Cind	Cind-Chr2:115548655	Cind9g01576	Cind-Chr9:175236724	wgd