AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind2g04064 ATGGGAACAGAAGTACACTGCAAAAGCTCTTTTGAAGGGTATTACTCCATGAGGGATGTTAATGAGGATTCCAATAGTAGTAGCTGGCCTCTTTTTTATGGAGAAAACAAAGCTTTGACTAATGGTCATTATTACAACGGCTTCGTACCAAGGACCGTTGCAGATGCGTATCCTGGATGTGACAAGGAGGCAATAAAGCAAAAAATGCTTGAACATGAAGCCATCTTCAAGAACCAGGTTTTCGAGCTTCATCGTCTCTACAGAAGACAAAGAGACATGATGGAAGAAGTCAAAAGAAAGGAATACCATAAGCATCAGATGTCAATTGATGCATCATCATCGTCAAGCTTCTTACCATCACAAAGGCCTTACGAAGATGGTCACAAATGGCAAATACCGAGCTTCCCATTGACCCACTCAAATTCCGCAAGGCCGTCCATTTTTGGAGCAGAGATAAATAATTCTCCTTTAAGTTGCTCAAAAGAGAATAATAGTATAAAGGATTCCGAGGGTGTAGAGGGTAGACCTTCAAAAGTTAGAAAGAAGTTATTTGATCTTGAACTTCCGCCTGATGACAACGTTGACCATGACGAACATGAGGAAATGCAATATAAACAGCCGTCCGAAGAATCAAGTTATAAAGATACTTCATCGGGTCAATTTGTTAAGGGGTCTAATGGACTGGCTGATCTTAATGAGCCTGTCCATGTTGAAGAAGCAGTGGCTCATGCATCAGTTAAACCAAGAGGGCCACAATTTATTACTCCAAGTGGCAATAGTAGAAGCAATATGAACTTCACACCAGGAACTTATACCGATCATTCCCGCTTTAATCAAACTTCTTTACCCTTCCCTCCTTCGCGTACAAATGCTTCATACCCGTACATGAATGCTACAGATTTGGCAAATTCTTGGGGAAAGCCAAACGGTAGTTTCACAAATAAGTTAAATTCGTTTCAGAAGCAACCGTCTTTTCTATCATCTCCAAAAAGCCACGGGGTTTATGGAGACAAGTGGCTTATGAATGGATGTTATACACCAAATGGATTTCATCATGGGTCATCATCCGGATCAAAAGATGTATATACCCGTTTGCCTTCTGATGGTTATGATCAAAGAAACCGCAATAATCTTGAGGATAAGTCGCACAGTTTCTTTAAAGGTTCAAACTTTATCGATTTGACTGGTAGTAATAAAGGCATTGACTTGAATAAAGATAGCAATACTGAAAGAAAATGTGATAAAACAGTACCCCCATGGCTTCAAAATAAACCGGTTATCTGTAATAAAGATTCCCGTGTTGACAATCGCGTGGAAAATAATGGAAAGATTCTCGGGAATTCTTGTGTTTCGAAAAACGAGTCTTCGTCACTTGTGTCTACCTCAGCATCACTTTGTTGCCCTGATAATGGCAAAATAAAAATGGAAACGGAAAATAGAGGATTTGATATGAATGTTGCATGGGATGATCCTGAAAGCAAACAGATTGAGATGGAAGGTGGTAATCTCGAAAAAGAAACAGATAAAATCAAGAACCATTTTGACTTGAATTCATGCTTGACTGAAGACGATGATTTGATGGCACATGAGTCTGTTAAAAGCTCAAGTGAGAGAAGGAAGACGATAACAATGGATATAGATTTAGAAGCCCCTGCTGTTCCCGAGGCTGAGGAAGAAGAAACAATTAACGAGGTCAAGAAAATTGATGATTGTGATTATGAGTCGATAGAAAAAATGGCATCTGAAGCAATAGTCGCGATGATTGGCATATCTAATCAGCAAGATCAAGCGGGATCCACGTCTGAGGTGGCGGTTTGTTCTGATGACAATGACAATGACAAAGGCCGTCTTTTATTGTTACTTGAGGCAGTTGAAAACGCGGGGTCCGCATCTAACGAGTTGGATGAGTACGAAGAGTTGACTTTGCAACTAGAAGAGACTAAAGAAGAAGATTACATGCCAAAGCCTTTAGCTACCGATTTTCCGGAGCCCGTAGAAGCGGGCCCGACACGACCTCGTAGAGGTCAAGCGAGGCGAGGTAGGCCCAGGAGGGATTTCCAAAGGGACATCCTTCCCGGGCTCGTTTCTTTATCAAGGCATGAGGTGACCGAAGATTTACAGACATTTGGTGGGTTAATGAAAGCGACCGGGCATTCTTGGAATGTAGGATTGACGAGAAGGAACGGGACCCGGGGAAGGCGGAAGTCTGTGGCCGTGGCTGTCGAGCCACCTCCCGCCGCCACCCCACCACCACCTCCTCCACCACCACCACCTTTGTCGGAGCAGCTTAATAACATGGAAGCGGTAGGACTAGATGAAAGAAGCTTAACGGGGTGGGGTAAGACGACAAGACGTCCTCGGAGACAACGTTGTGCTGCGGGTACTTCTGTGGCCGCGGTCCCGTTAACGTAA 2412 43.2 MGTEVHCKSSFEGYYSMRDVNEDSNSSSWPLFYGENKALTNGHYYNGFVPRTVADAYPGCDKEAIKQKMLEHEAIFKNQVFELHRLYRRQRDMMEEVKRKEYHKHQMSIDASSSSSFLPSQRPYEDGHKWQIPSFPLTHSNSARPSIFGAEINNSPLSCSKENNSIKDSEGVEGRPSKVRKKLFDLELPPDDNVDHDEHEEMQYKQPSEESSYKDTSSGQFVKGSNGLADLNEPVHVEEAVAHASVKPRGPQFITPSGNSRSNMNFTPGTYTDHSRFNQTSLPFPPSRTNASYPYMNATDLANSWGKPNGSFTNKLNSFQKQPSFLSSPKSHGVYGDKWLMNGCYTPNGFHHGSSSGSKDVYTRLPSDGYDQRNRNNLEDKSHSFFKGSNFIDLTGSNKGIDLNKDSNTERKCDKTVPPWLQNKPVICNKDSRVDNRVENNGKILGNSCVSKNESSSLVSTSASLCCPDNGKIKMETENRGFDMNVAWDDPESKQIEMEGGNLEKETDKIKNHFDLNSCLTEDDDLMAHESVKSSSERRKTITMDIDLEAPAVPEAEEEETINEVKKIDDCDYESIEKMASEAIVAMIGISNQQDQAGSTSEVAVCSDDNDNDKGRLLLLLEAVENAGSASNELDEYEELTLQLEETKEEDYMPKPLATDFPEPVEAGPTRPRRGQARRGRPRRDFQRDILPGLVSLSRHEVTEDLQTFGGLMKATGHSWNVGLTRRNGTRGRRKSVAVAVEPPPAATPPPPPPPPPPLSEQLNNMEAVGLDERSLTGWGKTTRRPRRQRCAAGTSVAAVPLT 803
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind2g04064 803 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 17 791 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 741 803 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 654 683 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 153 219 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 166 208 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 270 289 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 105 124 - -
Cind2g04064 803 Pfam Plant protein of unknown function (DUF863) 143 215 IPR008581 -
Cind2g04064 803 Pfam Plant protein of unknown function (DUF863) 439 791 IPR008581 -
Cind2g04064 803 Pfam Plant protein of unknown function (DUF863) 297 432 IPR008581 -
Cind2g04064 803 Coils Coil 620 650 - -
Cind2g04064 803 MobiDBLite consensus disorder prediction 743 761 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind2g04064 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr2:115448610 Cind4g01341 Cind-Chr4:190940654 dispersed
Cind Cind-Chr2:115448610 Cind9g01575 Cind-Chr9:175244949 wgd