AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind2g04264 ATGGAGTTTTGGGTGGTTGCAGCAGCTACAGGTGCTGGCTATGTAGCCAAACACTGGCAGAACTTATCAGGGGACAAAGATGGCTCATCAAAGCTGTCGCCTATGTTGTCACCACGGGTGCAACCAGATACATGCCAACTGTTCCGTAAGAAGCCTAACTCAGTTTCAGGTTCGGCTCCAATCTTTATCGAGAAACAAGTATTTCAAGATAACACAAATGATATTAATGGAAATCAACATCACTTTGAAACTTCTACCCCGCCTTCTAGCCCTCTTTTACATGAATTCAGAACCAAGAACGCTAATAGAAAATCTTTCTCGAGCCTAAGGCCCTTAATGTTGACTGGTAATAGCAGAGATTGTCAAAGAAGACAAGTGAAACAAGTTAATGATGTTAACGATCATAAGCTATTTTTCATGGAAGAAAAGGGAGCATCTGGGGAAGCAGATATGTTTGAGCCAATTGGATCAGTGAAGCTGCCAAGGAGACCAGAAAAAACGCATTCACAAGGCAAGGACACGGTGTCATTGTTCCTCGGGATTACAATTGGCATATTATCAAGTCTTGTGACTAATCAACATGAAATTGAACACCTAAATGAACTGCTAGAACAAGCTGAGAATATTGTTCAAGATTTACACAATAGACTTGAAGTAAAAGATGGATTTACCACAAAGGAGACTGGCACCAAAACAGATGGAACTACTCAAACTGATAGCTCAAAAGTTGAGAACTGTGAATTAACAAGTGATATCGAGGCAGAGCTTGAGGCCGAGCTTGAAAGATTGGAAGAAAATATGAAGGGTCCCACTCTGCAAAGATTGTCTGATGTGGTTGAGATTGATTCAGACTTTGAAGCAGATATAGCTAGAGGCGACTTGAACCTAGATGCACTAAACTGGCAACTTGATAGCCAATCTGAATCAGACAATGATGACAAATGGGTGAAAAGTGAAAGCACCGGGAAGCCCGTGTTTACTCCAAATTACACAGTTTCACCTCTTGATTTACGGTTACGTCTTCACGAAGTAGTCGAGTCAGAACTGAGAGCACGTATTGACGCGCTGGAGGCAGTTCTCGAGAACCGAAAAAGTCAAAGTAAGCCACATTCTCCAGAACCACAAGAAGAAAAATCTTTCTGGGATTTTGACCACACGAGAATTGAATCTTCTTCATCAACCCCTTAA 1188 41.67 MEFWVVAAATGAGYVAKHWQNLSGDKDGSSKLSPMLSPRVQPDTCQLFRKKPNSVSGSAPIFIEKQVFQDNTNDINGNQHHFETSTPPSSPLLHEFRTKNANRKSFSSLRPLMLTGNSRDCQRRQVKQVNDVNDHKLFFMEEKGASGEADMFEPIGSVKLPRRPEKTHSQGKDTVSLFLGITIGILSSLVTNQHEIEHLNELLEQAENIVQDLHNRLEVKDGFTTKETGTKTDGTTQTDSSKVENCELTSDIEAELEAELERLEENMKGPTLQRLSDVVEIDSDFEADIARGDLNLDALNWQLDSQSESDNDDKWVKSESTGKPVFTPNYTVSPLDLRLRLHEVVESELRARIDALEAVLENRKSQSKPHSPEPQEEKSFWDFDHTRIESSSSTP 395
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind2g04264 395 Coils Coil 189 216 - -
Cind2g04264 395 PANTHER EMB|CAB62613.1 1 368 IPR040348 GO:0008356(InterPro)
Cind2g04264 395 Coils Coil 346 366 - -
Cind2g04264 395 MobiDBLite consensus disorder prediction 361 385 - -
Cind2g04264 395 Coils Coil 246 273 - -
Cind2g04264 395 MobiDBLite consensus disorder prediction 361 395 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind2g04264 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1719159 Cind Cind1g03919 Cind-Chr1:112584534 Cind2g04264 Cind-Chr2:118636770
1767196 Cind Cind2g04264 Cind-Chr2:118636770 Cind4g01198 Cind-Chr4:295735089