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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind2g04267 ATGATCGTGAAGCGCGTGGATCCCACGCGCCGTGGGAGGGATGATGAGTCCGATGACGAAGGAAATGAGAGCATCTCCGGTACTATGATTGTGAAGACTAACCCTAGGCGCGTGGATTACACGCGCCGGAGAGATGAGGAGGAGGAGGACGATGACGAGGATGAGGAAGGAGGTGGATTTGGTACGTTTGTGGTGAGATCGGATGAGAGAGAGGACGAGTCGGTATCGGGGACGTTTGTGCGGCGGAGTGTAGGTGGAGGAATGTCTACGATGAGTAGAGCGGTAGCGAGTATGCAGGGTGTAGGGGAGGGGTTTGGGAAAGGGAGGGGGAAAACGTCTTCTCAAGATGGCGACGGAGGGCATTCTAGGAAACGGACGAGTAAAATGTCGTCTGGTTCCATTGCGGATAGTATTACTAGAGAAGATCCGTCTACTAAGTATGAATTGCTTCATGAACTTGGTACAGTGAAATTTTTTAATACTGGCATTTGTTGTATAGCTATAGAATTTACTTTATATATATATTAG 528 48.86 MIVKRVDPTRRGRDDESDDEGNESISGTMIVKTNPRRVDYTRRRDEEEEDDDEDEEGGGFGTFVVRSDEREDESVSGTFVRRSVGGGMSTMSRAVASMQGVGEGFGKGRGKTSSQDGDGGHSRKRTSKMSSGSIADSITREDPSTKYELLHELGTVKFFNTGICCIAIEFTLYIY 175
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind2g04267 175 MobiDBLite consensus disorder prediction 126 140 - -
Cind2g04267 175 MobiDBLite consensus disorder prediction 1 18 - -
Cind2g04267 175 MobiDBLite consensus disorder prediction 1 84 - -
Cind2g04267 175 MobiDBLite consensus disorder prediction 100 141 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind2g04267 - -
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cind1g02241 . 523 571 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G79640 51.02 1.98e-08 47.0
Cind1g02243 . 5 683 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G79640 53.77 0.0 702.0
Cind2g00117 . 216 242 MAP Kinase Kinase Kinase Kinase Protein gene family AT4G24100 74.074 8.92e-09 48.5
Cind2g00453 . 198 297 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 84.0 2.06e-56 189.0
Cind2g00455 . 198 297 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 82.0 3.75e-56 182.0
Cind2g01973 . 4 684 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G79640 51.971 0.0 634.0
Cind2g04267 . 185 256 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G69220 54.795 6.50e-12 61.2
Cind2g04268 . 298 816 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G69220 60.417 0.0 582.0
Cind3g00895 . 458 568 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 30.833 1.01e-08 52.0
Cind3g04684 . 193 254 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G53165 79.032 2.99e-29 115.0
Cind3g04890 . 224 363 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 70.423 5.35e-64 207.0
Cind3g05666 . 139 508 MAP Kinase Kinase Kinase Kinase Protein gene family AT3G15220 61.995 8.78e-150 444.0
Cind4g01805 . 7 673 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 63.081 0.0 866.0
Cind7g02462 . 507 673 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 44.199 2.35e-32 120.0
Cind7g02463 . 6 501 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 67.843 0.0 711.0
Cind7g03430 . 230 257 MAP Kinase Kinase Kinase Kinase Protein gene family AT4G10730 67.857 1.93e-06 47.8
Cind7g04092 . 228 252 MAP Kinase Kinase Kinase Kinase Protein gene family AT4G10730 80.0 3.98e-09 51.2
Cind7g04874 . 139 193 MAP Kinase Kinase Kinase Kinase Protein gene family AT3G15220 85.455 2.04e-28 103.0
Cind8g02652 . 116 188 MAP Kinase Kinase Kinase Kinase Protein gene family AT1G79640 48.75 5.00e-15 68.9
Cind8g03904 . 1 690 MAP Kinase Kinase Kinase Kinase Protein gene family AT3G15220 62.837 0.0 837.0
Cind9g02242 . 40 709 MAP Kinase Kinase Kinase Kinase Protein gene family AT4G10730 63.293 0.0 912.0
Cind9g02776 . 7 439 MAP Kinase Kinase Kinase Kinase Protein gene family AT4G14480 52.381 1.83e-150 435.0
Cind9g03863 . 6 674 MAP Kinase Kinase Kinase Kinase Protein gene family AT5G14720 61.974 0.0 838.0