Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g00476	ATGGAAGAATCACAAGAGATATTACTAAACTCATTATCATCCGCCGGAGTACCAATCCCGCCGGAAACATATTCCGTCAACGATCTATCACCGGAAACACTAGTATCAATCTGCGGTCATTCTCTTCGTATAATAACCAAATCGGAATCATTTCCGGTGACTTTGCCGGAATCTATGGCTGATCGTTTCAAAATGTGTACGGATCTCTCGTCGGCGTTTGAGAACCTAGGGTTTATCGGTGATGTTAGCTTTCATAAGTTCCTGTATCCATCTGAAGAAGACATGTATAAGTTGATAAGATTTTTGGTTGGGAGGCTCTCTGAATCATCTACAACTGCTGTATCACCAGACACCAAGTTCAATAATGCCAATGCAACGGTAAATATTGAGCGTTTGGAACAAACTTCTAGTGATGCTGACACTGAGGAACGGAATTTGCATACTAAAGTTGAAGATTTAAAACTGAGAACTGATGAAGCTGTATCAAATTCTATCCAATGTACTGAAGATGTTGCAGCTGAAAGCGGGAATTCGGAAACTAATAAAGTCGGATTTGGTAATATGGAAAATGGCGGAGGTTCGGCAGAGGATACACAGTTGTCAAGGAAATCTGATGGCGGTAAGGGAGAGGTTATATCTCAGGAAGACGTTGAATATAAACTTGAGCAGGCACCCATTTCTCATCAAGACAAATCATCACAGGAAAATGTGCATTCAGAGGAATTAACTGCAAGGTCATTGGAGTTGCAACAACTTGAAGAGCAACATGATTTGTTAAAAGCGGCGGTGGAAATGGCTTCCGACAAACAGATGCCTCTGGATTCATACATTACACAGCTGAGCGAGCAAATAGATGCAAAGAGACATAATCTTGCAAAAATAGAGTCAAAATGGAAAGCCACCATAAGGCCTTTAGAAGAGAAGAAACAAAAACTCGAAGAAGCTATGTGCGTAAAACAACCAGATTCTCAGCAAAGTTGGAAAAAGCTTGAGCAGGACTTGGTATGCGTATTATCTGAAACAAAGCAAAGGGAAGATGAACTTTTAATTCTGTCAAAAGAAGTTGAGAAACTACCCAAATTGGGTACAAGAAGATCCTACATTGAGCGGATAAAAGAGATTACTAAGAACAGCCGGAAACAGGACATTGACATAGAACGTATCTTAAAAGAGACACGAGAGCTTCAGTTGGAGAGTAACATGATACAAGAACGCTTGCATCGAACTTACGCTGTGGTAGATGAAACACTACTGAGGGAAGCAAAGAAAGACCAAGCAGTGGAGCAAGCTCACAATTTGCTGACAGCCATTCATGAGAGTTTTGAAGAAATTACAGAAAAGATCCTTGCGACTGACCGGGCTCGTAGAGAAGCAACGGACCTTGAAACAAAGCTTTCAAGTGTCACTGCACGAAGTTTAAACATTGACAAACTACAAGCAGATCTCGATGCCATTAGGAAGGAAAACGAATACCTTCAAAGTCGATTGAGTAATTCTTAA	1500	40.8	MEESQEILLNSLSSAGVPIPPETYSVNDLSPETLVSICGHSLRIITKSESFPVTLPESMADRFKMCTDLSSAFENLGFIGDVSFHKFLYPSEEDMYKLIRFLVGRLSESSTTAVSPDTKFNNANATVNIERLEQTSSDADTEERNLHTKVEDLKLRTDEAVSNSIQCTEDVAAESGNSETNKVGFGNMENGGGSAEDTQLSRKSDGGKGEVISQEDVEYKLEQAPISHQDKSSQENVHSEELTARSLELQQLEEQHDLLKAAVEMASDKQMPLDSYITQLSEQIDAKRHNLAKIESKWKATIRPLEEKKQKLEEAMCVKQPDSQQSWKKLEQDLVCVLSETKQREDELLILSKEVEKLPKLGTRRSYIERIKEITKNSRKQDIDIERILKETRELQLESNMIQERLHRTYAVVDETLLREAKKDQAVEQAHNLLTAIHESFEEITEKILATDRARREATDLETKLSSVTARSLNIDKLQADLDAIRKENEYLQSRLSNS	499

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g00476	499	Coils	Coil	277	297	-	-
	Cind3g00476	499	Coils	Coil	249	269	-	-
	Cind3g00476	499	MobiDBLite	consensus disorder prediction	171	200	-	-
	Cind3g00476	499	Pfam	CCDC22 protein N-terminal domain	1	107	IPR048349	-
	Cind3g00476	499	Coils	Coil	475	495	-	-
	Cind3g00476	499	MobiDBLite	consensus disorder prediction	171	212	-	-
	Cind3g00476	499	PANTHER	JM1 PROTEIN	215	498	IPR008530	GO:0097602(PANTHER)\|GO:2000060(PANTHER)
	Cind3g00476	499	Pfam	CCDC22 protein coiled-coil region	189	469	IPR048348	-
	Cind3g00476	499	Coils	Coil	122	142	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g00476	K23343	coiled-coil domain-containing protein 22

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:299343847	Cind4g01354	Cind-Chr4:190393315	dispersed