AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g00488 ATGAAGTTGAAACGAAGAAGAGCAGTTCAAGTGCCTCCCAGAATTAATTCATTCATCGTTGGTGTAGTTACTGCACCGCTCGAAAAAATCCAGGACCCCTTGAAAAGTTTCGTTTGGGAATTTGAGAAGGGGGACTTCCATCATTGGATTGGTCTATTTGACTATTTTGATATGTACTTCGAGAAATACATAACACCAAGGAAGGATTTGCAGCTTGAGGATGATTTCTTGGAGCATGATCCTCCGTTCCCGAGAGAAGCTGTTCTTCAGATTCTACGTGTTGTCCGGATAATTCTAGAAAACTGCACAAATAAACACTGCTATAGTTCTTATGAGCATCATCTCTCTTCTCTGCTTGCTTCGACTGACGTGGACGTGGTTGAAGCCTGTTTACAAACTTTAACCGCATTCTTAAAGTCAGTTGGAAAACATGCTATAAAAGACGCCTCACTGCGCTCTAAACTATTTGCTTTTGCACAAGGCTGGGGAGGAACGGAAGAAGGGCTTGGATTGGTTGCATGCGCTATAGAGAATGGATTAGACCCAATTGCTCATGAATTGGGTAACACCCTACATTTTGAGTTCTATGTAGATAATGACAATCAGGGATTGCAGATTATTCATTTGCCCGGCGTTAACGCTTGCCAACAGTCTGACCTTGAACTTATGCAACAGCTGAGCCTTTGGATCACATTCTGCACGTTTAAAGTACACGTGTATTCGCCTCTTCATGCGTTTATCTTTCTTGTTCAAGCTTGTGGTGCTAAAACTGATGATTCGGCTGCTTTTTTCAACGCTGAACCTGAGTTCATCAATGAACTGGTCACCTTGTTGAGCTATGAAGATGCAGTTCCTGAAAGAGTCCGAATACTATGTCTGCTTTCATTGGTTGCTGTTTGTCAAGATCGCAAGGCAGATGTTTTGGCTGCTGTAACATCTGGTGCTCAGCGTGGCATCCTATCCAGCCTTGCACAGAAGGCTATTGATGCTGTAGCTAGTAAATCATCTGAGTGGTCGGTTTCTTTTGGGAGGCTTTAA 1038 43.06 MKLKRRRAVQVPPRINSFIVGVVTAPLEKIQDPLKSFVWEFEKGDFHHWIGLFDYFDMYFEKYITPRKDLQLEDDFLEHDPPFPREAVLQILRVVRIILENCTNKHCYSSYEHHLSSLLASTDVDVVEACLQTLTAFLKSVGKHAIKDASLRSKLFAFAQGWGGTEEGLGLVACAIENGLDPIAHELGNTLHFEFYVDNDNQGLQIIHLPGVNACQQSDLELMQQLSLWITFCTFKVHVYSPLHAFIFLVQACGAKTDDSAAFFNAEPEFINELVTLLSYEDAVPERVRILCLLSLVAVCQDRKADVLAAVTSGAQRGILSSLAQKAIDAVASKSSEWSVSFGRL 345
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g00488 345 SUPERFAMILY ARM repeat 79 307 IPR016024 -
Cind3g00488 345 Pfam Domain of Unknown Function (DUF908) 85 142 IPR010309 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g00488 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:298822642 Cind3g01155 Cind-Chr3:121104457 dispersed