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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g00498 ATGAAGATTATGCAAGTAATCTTCATGATCGCCACTGTAATGGCCATAGCTATTGCTCTCACAGTCACGATCACCGGTGAAAGTCAGGAAACAACGCTCAATGTACCACCCGTTGTCAAAACGTCTCCTAAAAGGGTTAGTAGGTTTCTAGCAGAAACAAAAAACCCACGAGCAGCGGACCATTGCAATAAAGACAACGAGATATGTTACTACTTGGAAGGTAGAAACTCGACATGTTGTAACAACAAGTGTATGGATTTAACCGAGGATAAGCATAATTGTGGAGCGTGCAAGAACAAGTGTAAGTTTACGAGCTCGTGTTGCAGAGGAGAGTGTGTGAATTTGGCTTATGATAAGAGGCATTGTGGTTCGTGTGGTAACAAGTGTATGCCCGGTGGTTACTGCATTTACGGGCTTTGCAACTACGCGTAA 432 43.52 MKIMQVIFMIATVMAIAIALTVTITGESQETTLNVPPVVKTSPKRVSRFLAETKNPRAADHCNKDNEICYYLEGRNSTCCNNKCMDLTEDKHNCGACKNKCKFTSSCCRGECVNLAYDKRHCGSCGNKCMPGGYCIYGLCNYA 143
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g00498 143 PANTHER STIGMA-SPECIFIC STIG1-LIKE PROTEIN 3 4 143 IPR006969 -
Cind3g00498 143 Pfam Stigma-specific protein, Stig1 29 143 IPR006969 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g00498 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
67513 Cind1g06425 Cind3g00498
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr1:335862218 Cind3g00498 Cind-Chr3:298564468 dispersed