Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g00512	ATGAGTGTGGTATCCAAGGAAAGCATACAAGTGATGGCACAAAGTATTGGTCTTTCCAATTTATCTCCCGATGTTTTGCCTGATCTCGCTAACGATATCGAATACCGTGTTCGCGAGATCATGCAGGAAGCTATAAAAGTTATGCATCATGGTAAGCGAACTGTCTTGACTACAGAGGATGTGGATAATGCCCTCCAATTTAGAAAAATGGAGCCAATATATGTTGCAACTGGGAATTCTCTGCGGTTCAGAACGGCTGGTAGGCATAAGGATTTGTTTTACATCGAAGACAAAGATGTGGAATTTAGAGAGCTTTACTTTGAAAAGATCACAGATGTCACTGTAAGTCGGTCAAACTCGATCATCTTTGACAAAGCATTGATGAGCTTGGCGACCGATGCAGGGCTCCATCCTTTGGTTCCTTATTTCATATACTTTGTCGCTGAAGAGGTTACTCGTAACTTAAACAACTTTCAGCTTTTATTTGCTTTGATGCGACTTGTTCAAAGTCTTTTACAGAATCCAACCATGAACATTGAACCATATCTGCACCAACTGATGCCGTCTGTAATGACTTGCCTTGTTGCGAAAAGCTTGGGGAATAAGTTCACCGATAACCACTGGCAACTTAGAAACTTCACAGCTAACCTGGTGGCTTTAATATGCAAAAAGTTTGGGTATGTGTATCATAATCTCCAGTTACGTGTGACTAGGACTCTTCTTCATACTTTCTTGGATCCGGCAAAAGCATTTCCGCAGCATTATGGTGCCATAAAAGGGATTACTGCTCTAGGATTAAATGTGGTGCGTATGCTTTTGCTACCAAACCTTGATGCATATCTACAATTTATAGAACCAGAAATGCAACTTGAGAAGCAAAAGAACGAAAACAGGAGGCATGAGGCTTGGAGAGTGCATGGAGCTTTGATGTGTGCAGCGGGTCTATGCATTTACAATCAGCTTAAGACGATTCCCAATCTGTTAGCTCCACCAACACATAGCATCTGGAAGAAAAATGGAAAAGTCGGGACATCAAACCCAAACAAACGAAAGGCAGCGATGATGAACAACATGATGGAACAGCCACTTAAAAAAGTAGCAACAACTGATGGTTCACATCTGGTAAAGGTAGAGATGCAAGGAGGCAACAGCGGGTTTTCAATAACTCGTGATGGTGGGATGCATCAGCTACCAAGGTTTATGCCTAATGACAACATGCCAGGAAGCAGTGGCAGGAGGGACAAGTTCGGTGGCGTATCTCAGATGTCATCAGTGGCTGTGTCCCGAGCATGGAAAAAGGAAGTAAATGCTGGTCACTTGCTTCCTAAACTGTATGACGTTTTCGGTCAAAGCATGTTTCCTTTTGTACCTTCCCCAGAATTGTGTAATATACACCTATGA	1401	42.47	MSVVSKESIQVMAQSIGLSNLSPDVLPDLANDIEYRVREIMQEAIKVMHHGKRTVLTTEDVDNALQFRKMEPIYVATGNSLRFRTAGRHKDLFYIEDKDVEFRELYFEKITDVTVSRSNSIIFDKALMSLATDAGLHPLVPYFIYFVAEEVTRNLNNFQLLFALMRLVQSLLQNPTMNIEPYLHQLMPSVMTCLVAKSLGNKFTDNHWQLRNFTANLVALICKKFGYVYHNLQLRVTRTLLHTFLDPAKAFPQHYGAIKGITALGLNVVRMLLLPNLDAYLQFIEPEMQLEKQKNENRRHEAWRVHGALMCAAGLCIYNQLKTIPNLLAPPTHSIWKKNGKVGTSNPNKRKAAMMNNMMEQPLKKVATTDGSHLVKVEMQGGNSGFSITRDGGMHQLPRFMPNDNMPGSSGRRDKFGGVSQMSSVAVSRAWKKEVNAGHLLPKLYDVFGQSMFPFVPSPELCNIHL	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g00512	466	CDD	TAF6C	105	312	IPR011442	GO:0006367(InterPro)
	Cind3g00512	466	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	105	454	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(PANTHER)\|GO:0005669(InterPro)\|GO:0006367(InterPro)\|GO:0016251(InterPro)\|GO:0016251(PANTHER)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Cind3g00512	466	Pfam	TAF6 C-terminal HEAT repeat domain	104	277	IPR011442	GO:0006367(InterPro)
	Cind3g00512	466	Pfam	TATA box binding protein associated factor (TAF)	1	65	IPR004823	-
	Cind3g00512	466	Gene3D	-	103	300	IPR046344	GO:0006367(InterPro)
	Cind3g00512	466	SUPERFAMILY	Histone-fold	1	66	IPR009072	GO:0046982(InterPro)
	Cind3g00512	466	FunFam	Transcription initiation factor TFIID subunit 6	97	292	-	-
	Cind3g00512	466	SUPERFAMILY	ARM repeat	91	329	IPR016024	-
	Cind3g00512	466	SMART	TAF-cls	2	68	IPR004823	-
	Cind3g00512	466	Gene3D	Histone, subunit A	1	66	IPR009072	GO:0046982(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g00512	K03131	transcription initiation factor TFIID subunit 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:297163334	Cind8g02119	Cind-Chr8:248338136	dispersed