AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g00541 ATGGGTCATGGGGGATCAGGTGGATGGTTTAGGTGTTTTTTTAGTGAGACGTTGAGGAGTTCGATATGTGAAGGTGGGGGGATTCGGATGCATCCCGATAAGATTAAAATGTCGAATGGGGGCGAGGTTTTGGAGAGTGTGATTGGGAGAGGGGAGGATGAGGAATTGCCTCGGTTTGAGTTTGGTGCTTTTGATATTCAAGTTGGGTCGGTGTCGAAAAAGAATAACAAGCTTGTGGATGAGGCGTTTTTGAATGAGTATTTGCAAAATGGCGCTTGGGTTGAGGAGCCGACACTTTTGATCACTCGCTACGAGTATGCAAACCTTTTTCACACGGTCACGGACTGGTATAGTGCGTATGTGTCTTCCAGAGTTACTGGCTTGCCAAATCGGCCTCAATTGGTTTTTGTAGACGGTCACTGCATGACACAATTGGAAGAGACATGGAAAGCTGTGTTCTCTGGTCTAAGATATGCAAAGAATTTCAGTGACCCAGTTTGCTTTCGTCATGCTATTCTCTCACCTTTGGGTTATGAAACCCCCATGTTCAAGGGTCTGTCTGAAAACATTGATTGTTATGGGGCTTCTGCCCATGATCTATGGCAGAATCCTGATGACAAAAAAACAGCCAGGATCTCGGAATTTGGTGAGATGATAAGAGCTGCGTTTGCACTTCCTTTACACCGACCCCACCAGAGCTCAAAGTCAGGGTCACAAACTCATAATGTCCTCTTTGTGCGACGTGAGGATTATTTAGCTCATCCTCGCCATGGTGGAAAGGTTCAATCAAGGCTTAGTAATGAACAACAAGTATTTGATGCTTTGAAAAGCTGGTCATCAAGTCACACAGAATGCAGAATTAATTTAGTAAATGGACTTTTTGCACATATGTCAATGAAAGAGCAAGTGAAAGCCATTCAAGATGCATCAGTTATTGTGGGTGCTCATGGTGCAGGACTGACTCACATAGTGTCGGCGTCACCAGATGCAGAAATTCTAGAGATCGTTGCTAGTGAGTTTCGGCGGCCTCATTTTGAACTAATTGCTCAGTGGAAGGGGTTAAAATACCACCCAATATATCTGGGTGGATCACACGCTAATCCAACAGTAGTTATTGAAAAGCTTAGGAACATTTTGAAGAGCATAGGATGTTGA 1155 44.16 MGHGGSGGWFRCFFSETLRSSICEGGGIRMHPDKIKMSNGGEVLESVIGRGEDEELPRFEFGAFDIQVGSVSKKNNKLVDEAFLNEYLQNGAWVEEPTLLITRYEYANLFHTVTDWYSAYVSSRVTGLPNRPQLVFVDGHCMTQLEETWKAVFSGLRYAKNFSDPVCFRHAILSPLGYETPMFKGLSENIDCYGASAHDLWQNPDDKKTARISEFGEMIRAAFALPLHRPHQSSKSGSQTHNVLFVRREDYLAHPRHGGKVQSRLSNEQQVFDALKSWSSSHTECRINLVNGLFAHMSMKEQVKAIQDASVIVGAHGAGLTHIVSASPDAEILEIVASEFRRPHFELIAQWKGLKYHPIYLGGSHANPTVVIEKLRNILKSIGC 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g00541 384 Pfam Glycosyltransferase 61 228 332 IPR049625 GO:0016757(InterPro)
Cind3g00541 384 PANTHER PUTATIVE-RELATED 6 384 IPR007657 GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g00541 K03714 glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]