Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g00544 | ATGAAGACTAAGAGCAATCAGGTAACCAAGAGCAAGCCAGAAATACAAACCCAAGCTTCACAGGAGTCCCCAAGTGACCAACATAACGATGCTACAGAGGCTCCTGTTCCTGACACTGGTTCAGCCTCCATTTCGAGCAATGACAACAGAAAAGTTTCTCGAGAGGATATTGAACTTGTCCAGAACTTGATAGAACGCTGTTTGCAGCTGTATATGAACAAAGACGAGGTTGTGAAAACCTTACTAAATCGTGCAAGGATAGATCCTGGATTTACAGCTTTAGTGTGGCAGAAATTGGAAGAAGAGAATGCAGACTTTTTTAGAGCCTACTACATAAGGCTGAAACTGAAGAAGCAGATCATCCTGTTTAATCATTTGCTTGAACATCAGTACCATCTTACCAAGCATCCAGTGCATCCAAGGCTTCCTCTTGCTCCTATACAAAATGGCATCCATCCTATGCCAGTTAACAACTTACCAATGGGGTACCCTGTTCTACCACAACCTTCAATGGCAACTACTGGCCAACCTCATATGAATGCCATTGGTATGTCCAATTGTCATGTAGTCAATGGAGTGCCTGCTTCAAGTAACTTCCATCCAATGCGGATGAACTCTGGAAATGGAAGTATGGGGATGGATAGTAGTGCAACTGATGCCACACCAGCTATTCCAGGGAATGGGGCAATATCACCCATGTCAGATATGCCTATGAGCCCTACATCAGCATCCAGTGGTCATTTCCCGTTTACTACATCTGAAATATCGGGAATGGGAGTAGACACATCAGCTCTTGATACAGCTTTTACGTCTGACGTGGCAAGTTCTGTAGACTTGCATCTGCAACCTGATAATGGAACTTCTAGAGCTTTTGGTCATATCCCTTGGAATTTCAGCCTTTCAGATCTTACAGCAGATTTGTCAAATTTGGGAGATCTCGGAGCTCTTGGAAACTATCCTGGCTCCCCCTTTCTGCCATCTGATTCAGATTTATTACTTGATTCCCCGGAACAAGAGGACATTGTGGAAGATTTCTTTGCTGACTCTGTACCTGGACCACCGTGCTCCAATTCAGATGAGGAGAAGTCTTAG | 1092 | 44.14 | MKTKSNQVTKSKPEIQTQASQESPSDQHNDATEAPVPDTGSASISSNDNRKVSREDIELVQNLIERCLQLYMNKDEVVKTLLNRARIDPGFTALVWQKLEEENADFFRAYYIRLKLKKQIILFNHLLEHQYHLTKHPVHPRLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMATTGQPHMNAIGMSNCHVVNGVPASSNFHPMRMNSGNGSMGMDSSATDATPAIPGNGAISPMSDMPMSPTSASSGHFPFTTSEISGMGVDTSALDTAFTSDVASSVDLHLQPDNGTSRAFGHIPWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSDLLLDSPEQEDIVEDFFADSVPGPPCSNSDEEKS | 363 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g00544 | 363 | NCBIfam | TIGR01589 domain | 57 | 113 | IPR006476 | - | |
| Cind3g00544 | 363 | Pfam | Plant protein 1589 of unknown function (A-thal-3526) | 60 | 111 | IPR006476 | - | |
| Cind3g00544 | 363 | PANTHER | OS02G0137100 PROTEIN | 54 | 327 | IPR006476 | - | |
| Cind3g00544 | 363 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
| Cind3g00544 | 363 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g00544 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:294212316 | Cind3g03096 | Cind-Chr3:98914222 | dispersed | |
| Cind | Cind-Chr2:16257141 | Cind3g00544 | Cind-Chr3:294212316 | transposed | |
| Cind | Cind-Chr8:146972088 | Cind3g00544 | Cind-Chr3:294212316 | transposed | |
| Cind | Cind-Chr2:346328505 | Cind3g00544 | Cind-Chr3:294212316 | wgd |