Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g00562	ATGAGCAATATTGGTGATCTTCACAAAGTATGGGAAATAAGGACTCTAAAGAAGAAAGTTGGTGCAGAAGAAGCCCGTAAGTTCTTGGAAAAGATAGCCAAACAAGTTCAACCCATTATGCGTAATCATAAATGGAGAGTCAAGGTTTTATCCGAAATGTGTCCGAAGAATCCAAGGCTATTGGGATTAAACGTTAACCATGGTGCTCATGTGAAGTTGAGGTTAAGAAGGCCGAATACGGATTGGGATTTTTATCCGTTTGATGAAGTACTTGATACTATGTTGCATGAGTTGTGTCATAATGCTATTGGTCCGCATAATGTTGCTTTTTACAAATTGTGGGATGATCTTAGAAAGGAATGTGAGGATCTGATGAGTAAAGGAATTTCTGGCTCTGGTGATGGATTCGATCTTCCAGGTAGACGTTTAGGTGGCTTCACTCGTCAACCTCCTCTCTCATCTCTCCGCCAGACTGCACTCTCTGCTGCAGAAAATAGAGTGCGCCTGGGAACTCTTTTACCAACAGGACCTAAACGTCTTGGTGGTGATAAATCTATTATGTCTGCTTTAACTCCTGTACAAGCAGCTGCAATGGCTGCCGAAAGGAGATATCAAGATGATATATGGTGTGGCCTAGAGGAAATAGCGGATGAAGAAGAAAGTGGCACTGGTGTCCCACAAGAGCGGATGGGGCAAAATTCAAAATATGCGGCGTCCTCTAGTGGTCTAAGTGCCAATACAAATGCAAAGTCTCAGAAAAGAAGTCGACAGTTGGATAATGGTTCTAATTGCTGTGATGGTCATCCAGGATCTAATTTTGTCGACTTGACAGATGCTCCCTCAGTGTCCAACTCTGCAGTTAACGAAGTAACAGCTAATAAAAGAAGTCGCCAAACAGAAAGGGGCGCAACTATGCCTTCATCGTGTAATCTTGAGAAAAATTGTGTTGATTTAACAAGTGACGTCTCTACTAGTGAATCTGTAAGTAAAATTGAGTCATCTGTATGGGAGTGCATGGTATGCACATTGCTGAATCCGTTGTTAGCTCCAATCTGCGAGCTTTGTGGAACCCTCAAACCAAAAGCTGTGGAGGATAAGACATGGTCATGCAAATTTTGTACATTGGAAAACATTGTGAAGCTGGAGAAATGTGGAGCATGTGGGCAGTGGAGATATTCTTATGGCCAACCTATAGGAACCCCATCACCAAATGTGGGCACTTAA	1224	42.57	MSNIGDLHKVWEIRTLKKKVGAEEARKFLEKIAKQVQPIMRNHKWRVKVLSEMCPKNPRLLGLNVNHGAHVKLRLRRPNTDWDFYPFDEVLDTMLHELCHNAIGPHNVAFYKLWDDLRKECEDLMSKGISGSGDGFDLPGRRLGGFTRQPPLSSLRQTALSAAENRVRLGTLLPTGPKRLGGDKSIMSALTPVQAAAMAAERRYQDDIWCGLEEIADEEESGTGVPQERMGQNSKYAASSSGLSANTNAKSQKRSRQLDNGSNCCDGHPGSNFVDLTDAPSVSNSAVNEVTANKRSRQTERGATMPSSCNLEKNCVDLTSDVSTSESVSKIESSVWECMVCTLLNPLLAPICELCGTLKPKAVEDKTWSCKFCTLENIVKLEKCGACGQWRYSYGQPIGTPSPNVGT	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g00562	407	Pfam	WLM domain	9	204	IPR013536	-
	Cind3g00562	407	MobiDBLite	consensus disorder prediction	284	305	-	-
	Cind3g00562	407	SUPERFAMILY	Ran binding protein zinc finger-like	333	359	IPR036443	-
	Cind3g00562	407	ProSiteProfiles	Zinc finger RanBP2 type profile.	332	361	IPR001876	-
	Cind3g00562	407	ProSitePatterns	Zinc finger RanBP2-type signature.	368	387	IPR001876	-
	Cind3g00562	407	ProSiteProfiles	WLM domain profile.	1	205	IPR013536	-
	Cind3g00562	407	ProSiteProfiles	Zinc finger RanBP2 type profile.	364	393	IPR001876	-
	Cind3g00562	407	MobiDBLite	consensus disorder prediction	217	262	-	-
	Cind3g00562	407	MobiDBLite	consensus disorder prediction	226	262	-	-
	Cind3g00562	407	Gene3D	-	330	366	-	-
	Cind3g00562	407	PANTHER	DNA-DEPENDENT METALLOPROTEASE WSS1	3	406	IPR053000	GO:0005634(PANTHER)\|GO:0006281(PANTHER)\|GO:0008237(PANTHER)
	Cind3g00562	407	ProSitePatterns	Zinc finger RanBP2-type signature.	336	355	IPR001876	-
	Cind3g00562	407	SMART	zf-4	366	390	IPR001876	-
	Cind3g00562	407	SMART	zf-4	334	358	IPR001876	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g00562	K22685	DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr2:146373540	Cind3g00562	Cind-Chr3:293599907	dispersed
	Cind	Cind-Chr3:293599907	Cind4g01987	Cind-Chr4:341370632	dispersed