Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g01643 | ATGGGTTCTTCCTCATCATCACAGAAACCAGAGTCTACTACTCAAGGGGGTGGAAACACCGATTTTAAATCTGTTAGTGATCAAGAATGGAAAAGTAAGCTTACCGGAGAACAGTTTTACGTAACTCGACAAAAGGGGACGGAAAGGGCCTTTACCGGGGAATACTGGAACACCAAAACTCCTGGGACTTACCATTGCATTTGTTGCGACACTCCACTATATGAGTCATCGACCAAGTTTGATAGTGGAACTGGTTGGCCATCGTACTATCAGCCGATAGGAGACAATGTGAAGACAAAGTTAGACCTATCTATCATTTTCATGCCTCGACAAGAAGTTGTATGTGCAGTTTGTGATGCTCATCTTGGTCATGTATTTGACGATGGTCCTCCACCTACTGGGAAGCGTCATTGCATCAATAGTGCTTCCCTCAAGTTGAAGCCAAAGTAG | 450 | 44.22 | MGSSSSSQKPESTTQGGGNTDFKSVSDQEWKSKLTGEQFYVTRQKGTERAFTGEYWNTKTPGTYHCICCDTPLYESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPRQEVVCAVCDAHLGHVFDDGPPPTGKRHCINSASLKLKPK | 149 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g01643 | 149 | SUPERFAMILY | Mss4-like | 25 | 148 | IPR011057 | - | |
| Cind3g01643 | 149 | ProSiteProfiles | Methionine-R-sulfoxide reductase (MsrB) domain profile. | 27 | 149 | IPR002579 | GO:0033743(InterPro) | |
| Cind3g01643 | 149 | NCBIfam | peptide-methionine (R)-S-oxide reductase MsrB | 25 | 148 | IPR002579 | GO:0033743(InterPro) | |
| Cind3g01643 | 149 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Cind3g01643 | 149 | Pfam | SelR domain | 29 | 148 | IPR002579 | GO:0033743(InterPro) | |
| Cind3g01643 | 149 | PANTHER | METHIONINE SULFOXIDE REDUCTASE | 14 | 148 | IPR028427 | GO:0005737(PANTHER)|GO:0006979(InterPro)|GO:0016671(InterPro)|GO:0030091(InterPro)|GO:0033743(PANTHER) | |
| Cind3g01643 | 149 | FunFam | Peptide methionine sulfoxide reductase MsrB | 19 | 149 | - | - | |
| Cind3g01643 | 149 | Gene3D | Peptide methionine sulfoxide reductase. | 17 | 149 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g01643 | K07305 | peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:331530883 | Cind3g02215 | Cind-Chr3:378756859 | dispersed |