AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g01647 ATGTCTGGGAGGAATCGTGGACCTCCGCTTCCGATGAAAGGTGGACCACACGGTGGAATGCCACCTATTCACGAGCCTCCGTTTGGTAGGAACTTAGGTCCGATGCCTCATCCCGCTTTGCTTGAAGAGATGCGTGAAGCGCAGTTTCAGATGGCTCATCACAGACAAATCCCACCTCATCCTGGTATTTTCGAGGAGCGGTTAGCAGCTCAACATCAGGATATTCAGGCGTTATTGGTTGACAATCAGCGGTTAGCTGCGACCCATGTTGCGCTCAAGCAGGAATTGGAAGCTGCGCAACATGAGCTTCAACAAACAGATCATTTTGCTCGGAATTTTATAATGGAGAAGGATATGCAATTGAGGGAGTTGTATGAGAAGTCGGCAAAAATGGAACATGATTTGCATGGAGTTGAAGGCATGCGAGCAGAGCTTATGCAAGTGCATGCTGATGTTAAGGAGTTGACGGCTACACGTCAGAAACTTACTGCTCAGGTGCAGGCTATGACTCAAGATCTTGGCAGAGCTAATGTGGATTTGCAGCAAGTTCCGGCACTGAAGTCGGAAATTGGAGGGCTGAGACAGGAATTGCAGCGTGCGAGGGCTGCAATTGAACAGGAGAAGAAGGGGCATGCAGAGAACTATGAGCATGGTCAAGTGATGGAAAAGAATTTACTCACTATGGCTCGAGAGCTGGAAAAGTTGCGTGCTGAGATGGCTAATGCTGAAAAAAGGGCTCGCGCGACTGCAGCAACAGCGAATCCAAATCCAGGCTATAACCCAAATTATGGCAATCCTGAAGCTAACTATGCAGGGAACCCTTACCCTGAAGCCAACTATGCAGTGAATCCTTACCCTGCAAATTATGGCATGAGCTCTACGAATCAAATAAATCCTGTGCAGCCTGGTGTGGAAGCTTATCCTCAGTATGTGCCTGGACCTGGATCTTGGGGCACGGACATTGTTGATTGCATAAGATGTGATGTACTGCGGCTTGCTAGAAGATTTGAAGGGGCGGAGGTGCATGTGTTTCACTATCAAATGGTGAAGCTCGAGGCAAAAACAACACTCCTGTATTGTGCCTCAACAACAGAAATTCTGAAAGGCGTATCTCAGATGAAGGATAACTTACTTTGGAATCAATTTTGGAGGATTTTTGCTGAAACACACTTGGGCATTCTCATGGTCTGA 1191 47.44 MSGRNRGPPLPMKGGPHGGMPPIHEPPFGRNLGPMPHPALLEEMREAQFQMAHHRQIPPHPGIFEERLAAQHQDIQALLVDNQRLAATHVALKQELEAAQHELQQTDHFARNFIMEKDMQLRELYEKSAKMEHDLHGVEGMRAELMQVHADVKELTATRQKLTAQVQAMTQDLGRANVDLQQVPALKSEIGGLRQELQRARAAIEQEKKGHAENYEHGQVMEKNLLTMARELEKLRAEMANAEKRARATAATANPNPGYNPNYGNPEANYAGNPYPEANYAVNPYPANYGMSSTNQINPVQPGVEAYPQYVPGPGSWGTDIVDCIRCDVLRLARRFEGAEVHVFHYQMVKLEAKTTLLYCASTTEILKGVSQMKDNLLWNQFWRIFAETHLGILMV 396
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g01647 396 Coils Coil 82 102 - -
Cind3g01647 396 PANTHER PROTEIN FLX-LIKE 2 1 294 IPR040353 -
Cind3g01647 396 Coils Coil 190 214 - -
Cind3g01647 396 Coils Coil 145 172 - -
Cind3g01647 396 MobiDBLite consensus disorder prediction 1 28 - -
Cind3g01647 396 MobiDBLite consensus disorder prediction 14 28 - -
Cind3g01647 396 Coils Coil 225 252 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g01647 K27811 protein FLX/FLXL
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:331106373 Cind8g01113 Cind-Chr8:267153485 dispersed
Cind Cind-Chr3:331106373 Cind6g00912 Cind-Chr6:264586687 transposed