Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g01676	ATGACATCGACGAGGATGCCAACGTGGAAGGAGAGGGAGAATAATAAGAGGAGAGAAAGGAGAAGAAGAGCGATTGCTGCGAAAATATTCATGGGGCTAAGAATGTACGGGAATTATAAGCTGCCTAAACATTGTGATAACAATGAGGTTCTTAAAGCATTGGCTGATGAGGCTGGATGGACCGTCGAACCTGATGGCACAACTTATCGTAAGGGATGCAAACCTTTGGAGCGAATGGACGTTGGTGGATCTGCATCAGCAAGCCCATGTTCATCTTACCAACCAAGTCCGTATGCCTCGTATCACCCGAGCCCCCCATCCTCAGCAATAGCGAGCCCATCCTCATCCTCTTACACACCAAACACGCACCCTGACTCACTTATCCCATGGCTCAAGAATCTTTCATCTTCATCCTCATCATCATACTCAGCCAAGCTTCCACATCTTTACTTCCACACTGGGTCCATTAGTGCACCAGTGACCCCACCCATGAGCTCTCCAAAGGTTCGGTCCCCGCCATGTGAACCTCATTCTGAATGGTTCACTGGTATTCGTCCCACGTCGCCAACTTTTAGTCTTGTAGCATCAAATCCATTTGGGTTCAAGGAAGCGGCTGTATCTCATGGTGGGTCACGAATGTGGACCCCTGGACAAAGTGGGACATGCTTTGCTGCAATTCCTTCAGGGTTTGATAACAATGCCGATATACCAATGGCGGAAGTAGTTTCTGATGAATTTGTGTTCGGTAGCAATGCGGGTGGGAGGGTAAAGCCATGGGAAGGAGAAAGGATCCACGAGGATTTTGGGTCTGATGATCTTGAGCTTACTCTTGGAAGTTCAAAAACCAGATAG	852	48.12	MTSTRMPTWKERENNKRRERRRRAIAAKIFMGLRMYGNYKLPKHCDNNEVLKALADEAGWTVEPDGTTYRKGCKPLERMDVGGSASASPCSSYQPSPYASYHPSPPSSAIASPSSSSYTPNTHPDSLIPWLKNLSSSSSSSYSAKLPHLYFHTGSISAPVTPPMSSPKVRSPPCEPHSEWFTGIRPTSPTFSLVASNPFGFKEAAVSHGGSRMWTPGQSGTCFAAIPSGFDNNADIPMAEVVSDEFVFGSNAGGRVKPWEGERIHEDFGSDDLELTLGSSKTR	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g01676	283	Pfam	BES1-BZR1 plant transcription factor, N-terminal	3	135	IPR008540	-
	Cind3g01676	283	MobiDBLite	consensus disorder prediction	1	20	-	-
	Cind3g01676	283	MobiDBLite	consensus disorder prediction	95	118	-	-
	Cind3g01676	283	PANTHER	BES1-BZR1 HOMOLOG PROTEIN 3-RELATED	1	283	IPR033264	GO:0003700(InterPro)\|GO:0006351(InterPro)\|GO:0009742(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g01676	K14503	brassinosteroid resistant 1/2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	67302	Cind1g03244	Cind3g01676

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:329318657	Cind3g01818	Cind-Chr3:17767924	dispersed
	Cind	Cind-Chr1:361981697	Cind3g01676	Cind-Chr3:329318657	wgd

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cind1g03244	ACH	1	325	BZR Transcription Factor family	AT1G78700	65.549	4.24e-111	324.0
	Cind2g01923	.	22	335	BZR Transcription Factor family	AT1G75080	50.156	1.19e-76	234.0
	Cind3g01676	ACH	1	325	BZR Transcription Factor family	AT1G78700	65.538	1.88e-107	313.0
	Cind3g01818	.	1	325	BZR Transcription Factor family	AT1G78700	70.122	6.10e-129	369.0
	Cind4g05136	.	22	335	BZR Transcription Factor family	AT1G75080	60.976	8.14e-102	300.0
	Cind4g05472	.	22	335	BZR Transcription Factor family	AT1G75080	61.162	8.75e-102	300.0
	Cind7g01519	.	23	334	BZR Transcription Factor family	AT1G75080	61.538	1.87e-106	311.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Cind	BES1_N	3.7e-59	No_clan		TF	BES1