Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g01678 | ATGAGTGGCGCGTGTCCGTCACCTGATCCTAGACTGAACTACCGTCCCGTAATTGGGATAGTGAGTCATCCAGGTGATGGTGCATCGGGTAGGCTTAGTAATGCGACCAATGCGTCGTATATTGCGGCTTCGTATGTTAAGTTTGTGGAGTCTGCTGGTGCTAGAGTTGTTCCGATTATTTATAATCAACCAATGGAGATTATACAAGCAAAACTCAATCTAGTCAACGGAGTGCTTTTTACAGGTGGATGGTCTAAGAGTGGCCTCTACTTTGATGTCATTGAGGAAGTTTTTAATCAAGTCCTGAAGAAGAATGACGCTGGTGAACATTTCCCATTGCTTGCTATATGCTTAGGGTTTGAACTCGTAACGATGATTGTTAGCAAAAACAATAACATCCTTGAAGCCTTTAGTGCATCAGATCAAGCATCCACACTGCAATTCATGAACAACATTAATATTGAAGAGACTGTGTTTCAAAGATTTCCTCCCGAGTTGGTTGTCAAGTTGAGTACAGAATGCCTTGTGATGCAAAACCATAAATACGGAATATCGCCTGAAACATTTCAAAAGACCAAGGAACTATGCAGTTTCTTTAAGGTCATAACAACTAGTACCGACGAAAATAACAAGGTATATGTATCAACAGCTCAATCCGAGAGGTATCCCGTGACTGCTGTCCAGTGGCATCCAGAGAAAAATGCATTTGAGTGGGGCTCGTCGGTGATTCCACATTCAGATAATGCAATTCAAGTGACTCAACATGTTGCAAACTATTTCGTGAGCGAGGCTAGGAAATCCTTCAACAGACCGCCTAATGATGAAGTGCTAAAAAATCTTATTTACAATTACAGCCCCACTTATTGCGGGACGGCTGGGAAAGGATACGATGAGGTTTACATCTTCACCGAGAATGAAAAGATGGCTCGACTTTAA | 936 | 42.09 | MSGACPSPDPRLNYRPVIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVVPIIYNQPMEIIQAKLNLVNGVLFTGGWSKSGLYFDVIEEVFNQVLKKNDAGEHFPLLAICLGFELVTMIVSKNNNILEAFSASDQASTLQFMNNINIEETVFQRFPPELVVKLSTECLVMQNHKYGISPETFQKTKELCSFFKVITTSTDENNKVYVSTAQSERYPVTAVQWHPEKNAFEWGSSVIPHSDNAIQVTQHVANYFVSEARKSFNRPPNDEVLKNLIYNYSPTYCGTAGKGYDEVYIFTENEKMARL | 311 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g01678 | 311 | SUPERFAMILY | Class I glutamine amidotransferase-like | 37 | 302 | IPR029062 | - | |
| Cind3g01678 | 311 | Pfam | Peptidase C26 | 16 | 232 | IPR011697 | GO:0016787(InterPro) | |
| Cind3g01678 | 311 | Gene3D | - | 12 | 303 | IPR029062 | - | |
| Cind3g01678 | 311 | FunFam | Folate gamma-glutamyl hydrolase | 12 | 303 | - | - | |
| Cind3g01678 | 311 | ProSiteProfiles | Gamma-glutamyl hydrolase domain profile. | 7 | 303 | IPR015527 | GO:0008242(InterPro) | |
| Cind3g01678 | 311 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 31 | 270 | - | - | |
| Cind3g01678 | 311 | PANTHER | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE | 2 | 303 | IPR015527 | GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g01678 | K01307 | gamma-glutamyl hydrolase [EC:3.4.19.9] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr6:272858551 | Cind3g01678 | Cind-Chr3:329119575 | transposed | |
| Cind | Cind-Chr1:362057978 | Cind3g01678 | Cind-Chr3:329119575 | wgd |