AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g01962 ATGGTGGATTTAGAGGAGTATGATGATGATGATCGGTGTCTAGTTTTGATGTTTGAAGATCTGCTTGGGGTGTATGATAATGGATATAGAGGATTCCAAAAATGGGCTAAAACCCTATCATCATCAGTCAATGCATCATTTAAAGATTCATCAAATTTGCACCAAGAACTCAACTGGTTACTCCAAGATTCTTTACAAAACCCAAATATACTCCAAACCCATGAAGAAAATAACAATCTTGTTGCATTAAGATTAAAGCTAGATGATTTATATGACTTATGGACTCAAAGAATTGAGAAAAGAAGACCTTTTCAGTATATAGTTGGTTGTGAGCATTGGAGGGATTTGATATTAAGTGTTGAAGAAGGGGTTTTGATTCCAAGGCCTGAAACTGAGTTGATTGTGGATTTGGTTAATGATGTGATTAAGGGTGGTGAATATGGTGATTTGGGGAATGGGTTGTGGGTGGATTTGGGGACTGGGAGTGGCGCTATTGCGATTGGGATTGGGAGGGTTTTAGGGGATTTGGGGAGAGTTGTTGGTGTTGATTTGAGTGACGTTGCGCAAGGGTCATGGTTTGAACCGTTGAGTGAGTTCAAAGGACAGGTTGCAGGCCTTGTAAGCAATCCACCATACATACCAAGCGGACACATTGATGGACTCCAACCCGAAGTTGGTAGACATGAACCAATACTGGCATTAGATGGTGGTGATGATGGCATGTCTGACCTTCTTCATATTTGCAATGGTGCTGCTTCGATGCTAAAATCTGGCGGATTTTTTGCTTTTGAGACAAACGGTGAAGATCATTGCAGGTTTCTGGTGGACCATATGGAAACCCTTCACAAAGAAAGCTTCTGTAGTCTCAATATTGTACCAGATTTTGTTGGCATCCAACGTTTTGTAACTGGATTCAGATCATAA 924 40.69 MVDLEEYDDDDRCLVLMFEDLLGVYDNGYRGFQKWAKTLSSSVNASFKDSSNLHQELNWLLQDSLQNPNILQTHEENNNLVALRLKLDDLYDLWTQRIEKRRPFQYIVGCEHWRDLILSVEEGVLIPRPETELIVDLVNDVIKGGEYGDLGNGLWVDLGTGSGAIAIGIGRVLGDLGRVVGVDLSDVAQGSWFEPLSEFKGQVAGLVSNPPYIPSGHIDGLQPEVGRHEPILALDGGDDGMSDLLHICNGAASMLKSGGFFAFETNGEDHCRFLVDHMETLHKESFCSLNIVPDFVGIQRFVTGFRS 307
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g01962 307 Gene3D Vaccinia Virus protein VP39 187 306 IPR029063 -
Cind3g01962 307 Gene3D Vaccinia Virus protein VP39 118 186 IPR029063 -
Cind3g01962 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 59 277 IPR029063 -
Cind3g01962 307 PANTHER - 187 306 IPR052663 -
Cind3g01962 307 CDD AdoMet-MTases 156 217 - -
Cind3g01962 307 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 206 212 IPR002052 GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g01962 K02493 release factor glutamine methyltransferase [EC:2.1.1.297]