AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02005 ATGTCGGACCGCAGCAGTAGCACCGTAGCTACTGCAACTACTCCGGACTTCAACTTACCTGACGAAATACTCTCAGTACTCCCAACTGATCCTTATGACCAACTAGATCTTGCTCGTAAGATCACATCTATGGCGTTAGCTTCGCGCGTCTCGAAACTCGAAGGCGAAACGAGTAAGCTGAGAAATAAGCTCAATGAGAAGGACCGTCTGATTTTGGAACTTGAAGCTAAAGTTAATGAAGCTGAAGAGATGTGTAGGAGTGTTCAGTTACGCTTACAGATTACCGTTGAGGATAATGTGAAGCTGGTGGAGGAGAGAGATTCGTTAGCGATGACGTGTAAGAAGCTAGGTCGTGATTTAGCAAAGCTGGAGACATTTAAGCGACAACTGATGCAGTCACTAAACGACAATGATTCAACTCAAGCTGCAACTGTAGATATAGGAACCTATGACCAATCCGCTCCCAGAGCTTATCCAGAAGAGGAGACAAATGGCTATAGAAGGCACCGCTCTTTTAGCTCTGTAGATGGTGGAAACATGCCTAATGACGCCTCAAAATTTGCTGGTCAAAGGTTTTCCATGACACCATATATCAGTTCACGTGCAACTCCAACTGGAACACCAAAGATTATCTCTACAAGCGTGTCACCTAGAAAGTATTCTGCTTCTGGTGCTACATCCCCAACAAAAAATCATCATGAAGGCCGTACTGGTGGCATGTCATCATGGTACTCATCAAGTCAACAATCTTCTGCTGGAAGCTCTCCTCCTCGTGGCCCCCCAATACCAGGCCGTAACAGTAAGATTGATGGAAAGGAGGTCTTTCGTCAAGCAAGGAGTCGTCTATCTTATGAACAGTTCAGTGCCTTTTTAGCAAATATAAAGGAGTTAAATGCTCAAAGACAATCTCGCGAGGAGACATTGAGGAAGGCAGAAGAAATATTTGGGAATGATAACAAGGATCTTTATCTATCATTTCAAGCTTTGCTAAATCGCAACAAGCAATAA 1008 43.95 MSDRSSSTVATATTPDFNLPDEILSVLPTDPYDQLDLARKITSMALASRVSKLEGETSKLRNKLNEKDRLILELEAKVNEAEEMCRSVQLRLQITVEDNVKLVEERDSLAMTCKKLGRDLAKLETFKRQLMQSLNDNDSTQAATVDIGTYDQSAPRAYPEEETNGYRRHRSFSSVDGGNMPNDASKFAGQRFSMTPYISSRATPTGTPKIISTSVSPRKYSASGATSPTKNHHEGRTGGMSSWYSSSQQSSAGSSPPRGPPIPGRNSKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQRQSREETLRKAEEIFGNDNKDLYLSFQALLNRNKQ 335
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02005 335 Coils Coil 50 91 - -
Cind3g02005 335 PANTHER OS03G0659800 PROTEIN 16 333 - -
Cind3g02005 335 Coils Coil 294 314 - -
Cind3g02005 335 MobiDBLite consensus disorder prediction 156 271 - -
Cind3g02005 335 MobiDBLite consensus disorder prediction 175 255 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02005 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr1:156438630 Cind3g02005 Cind-Chr3:308779064 dispersed
Cind Cind-Chr3:17600447 Cind3g02005 Cind-Chr3:308779064 dispersed