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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g02022	ATGGGTGATAGTCAGTACTCCTTTTCGCTAACTACTTTCAGTCCTTCTGGTAAGCTTGTTCAGATTGAACATGCTCTCACAGCTGTTGGCTCAGGTCAAACTTCATTGGGGATTAAAGCTTCTAATGGGGTCGTGATTGCAACGGAAAAGAAGCTTCCATCCATTTTAGTCGACGAGACATCTGTGCAAAAGATCCAGATCTTGACTCCCAATATAGGAGTTGTATACAGTGGAATGGGACCTGATTCTCGAGTTCTAGTCAGGAAGAGTAGGAAGCAGGCAGAGCAGTACCACCGGCTATACAAAGAGCCCATCCCTGTTACACAACTTGTAAGGGAAACCGCGGCTGTTATGCAAGAGTTTACTCAGTCTGGTGGTGTACGGCCTTTTGGTGTTTCACTCCTTGTTGCTGGTTATGATGACAAAGGTCCCCAACTTTATCAGGTGGACCCCTCAGGTTCTTATTTCTCCTGGAAAGCTTCGGCCATGGGAAAGAATGTGTCTAATGCAAAGACATTTTTAGAAAAGAGGTACACTGATGATATGGAGCTTGAGGATGCGATACACACAGCTATTTTAACATTGAAGGAGGGATTTGAAGGACAAATATCTGGCAAAAACATTGAGATTGGTGTTATTGAGGCTGACAGAACATTCAGAGTTCTAACTGCAGCTCAGATTGAAGACTATCTTCAAGAAGTAGAATAG	708	43.64	MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDETSVQKIQILTPNIGVVYSGMGPDSRVLVRKSRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELEDAIHTAILTLKEGFEGQISGKNIEIGVIEADRTFRVLTAAQIEDYLQEVE	235

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g02022	235	ProSiteProfiles	Proteasome alpha-type subunit profile.	21	231	IPR023332	-
	Cind3g02022	235	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	3	235	IPR029055	-
	Cind3g02022	235	CDD	proteasome-alpha-type-2	6	231	-	-
	Cind3g02022	235	FunFam	Proteasome subunit alpha type	3	235	-	-
	Cind3g02022	235	Pfam	Proteasome subunit	31	213	IPR001353	GO:0005839(InterPro)\|GO:0051603(InterPro)
	Cind3g02022	235	PANTHER	PROTEASOME SUBUNIT ALPHA-BETA	4	232	IPR050115	GO:0010498(PANTHER)\|GO:0019773(PANTHER)
	Cind3g02022	235	SMART	Proteasome-A-N-2	6	28	IPR000426	GO:0006511(InterPro)\|GO:0019773(InterPro)
	Cind3g02022	235	ProSitePatterns	Proteasome alpha-type subunits signature.	6	28	IPR000426	GO:0006511(InterPro)\|GO:0019773(InterPro)
	Cind3g02022	235	Pfam	Proteasome subunit A N-terminal signature	6	28	IPR000426	GO:0006511(InterPro)\|GO:0019773(InterPro)
	Cind3g02022	235	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	5	234	IPR029055	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g02022	K02726	20S proteasome subunit alpha 2 [EC:3.4.25.1]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:310273629	Cind9g03095	Cind-Chr9:213964629	dispersed
	Cind	Cind-Chr3:310273629	Cind4g04621	Cind-Chr4:347190002	transposed
	Cind	Cind-Chr3:310273629	Cind4g02024	Cind-Chr4:340689007	transposed