Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g02071 | ATGGAATTCAAAGCACGTGATTATAGAAATGAAGATGAATTGTATTTACTTAAACCACTTTCAGTTACTTCACATCCTTTATCATCAATTGCATCGCCAGATAACCAGGACCGTGGGAGCATTGAATTCTTTGATCCATTACGAGGGATATCGAATGAACCTGTCGAAGATATCGCCGTTGCGGAAAAACCCGCTACTAGTCAAGCAACCTCTCATCACTCCGCAAAAGAATGGGCATCTTTTAATAAGCTACTAATGCAGAGATTTCCTGTGCCAAAACAGATATCAGTTTCTGCATTATCGAGCAAAACTATAAAACGCAAGAAGGTAATCGGAGAACTGCAACCAAATAAGCGGTCAGATGAACTGAACGAATCTCAAAAGTTGACTGAAGGAGGACTTAAAACTGTAAGCCAGCAAGAGTATATCAGACGATTGCATGAGCTTAAAGACGAGATTAGGCGGTCTTGGAATTCTGATGATCGCGTAACGTCATTAAATCTGTCAATTAAGGTTGCTAAGCTTCTGATGGACACTTCCGTGGCACAGTTTTATCCAACGTTATTTGTTCTAGCTACTGATATACTGGACATGCTAGGTGACTTGGTATGGGACCGGATTAAGGAAAAAGCCGAGTTTGCAGATAATGGAACTAGAACATGCACTTTATCAGATGACTTTGAAGCAAATAATATATGCATTGAAGCCAGAGAGACCTGCAGTAACTGGTTCAGAAAAATTGCTTCCATTCAAGAGCTTCTTCCACGCATATATCTCGAGCTTGCAATATTTCCATGCTGGCGATTCCTGGATGATCATGTTATGGATAAACTCATGCGATTGGTTATGATGATAAGAGGGATTGCTGATCCGTTGGCATCAGCCTACTGTCGCTTCTTTTTAATTCACTGTGCTCAGAAACTTCCCAACTGTGATACAGGGTACCTGATAAGTTGCATCAGTGACCAAAAAATTGTACTTACGCGGATTGTATCTATGAAAGAAACCAAGTATGGGAACTTTTTAGGAGATCAAAAGTTGCTTATTAGCTTGATGGAACCAACAATCGAGTATACTATGAGATGCATTTTCAAGGATCCAAACCAGGTTGGTGATATGATAGTGAACCTTGATTTAGGGAAGAATCCGTCGGAATTAACTGGAAAAGCTCCTTGGATATCAATTTTTCTCTATTATTTACTACGGGAAATACCAACTGAAATAGTTTGTTCTAGTGCTTTAGAATTTCTTCACCTTGTTGACTGCAGCAGTGATTGTTCGTTTGACCAGTGTTTAAATTACAAGATGCTTGGGTTCAAGCTTTGTGAGGGTATATCACAAGTGAACACAGTTGATGCAGTAATTAATGAAGTAATTCAGGTTGCTACCAGAAGGAAGAGCCTTAATGAGTACTTGAAGATCTTGGACGCTTATATGGATATTATTCTTCAATATAAGATGGATGAATACCTAAGCTCCGTTCTAGGGGAAATATTTGAGAGAGTGTGCAATGAAATGGTTACCGAAGATGAACTGGCTAGCCTGCAATCAATTATTGTGAAGCTGGTCACACATTTTGATGACATGAAGTATGTTTTTGACCTGAACTATTTTGTTGACATATTAGATGTCATGCATGGGAGCTCTAGAAGCATCGTTTGTATGAACATCCTTACTATTGCCACAAGAAATGATCGCATCGATGATCCTACAACGGTAAAACTGCTTTTTGATGTTGCTCAATCTCTTCATGATAGTGTTGATTTTTCAAGCACGAAACAAGATGATAATCAACAGGCAGAGCGTCTGATTTCTCGTTTTGTTGATAAGGTTGATCATGGTACTGATTTGGATCGCCATTTTACATTCTTGGTTGAGTGTCGTGGAACATTCAGTAGCATGAATGATTTGAAGGAGCTCCTTGTTCATTCGAGCAATCTTCTAGCAACCAGAGCTTCGAGAGAGAAAAAAGATAATATCAGTTTCATCAAATCTTGTATCACTTTCAATGAAGTTACGATACCATGTATTCCATCTTATTCCAGGCAGCTAATCTTATATCTTGAAACCGCAGAGGTTTCCCTGTTTGGAGGCTTAATTTCTCATTCGGATGGACTTCTAGATTCCGCAGTCAGCTGCTTACAAGATTTGTTGGTAGATGGGTCGCGGAAATCCAATGAAGATGCTGATGGTATTGCTTCCTTAATGAGAAAGCTGTGCGGCTTCATCTTATTGGTTCCAGGTAATTCAGAACAAGGAGTCACCTACATCCCCAAGAGCATATTATCCTTGCTTGATTCACAATCATGGATTACACCAAAACTAAGGATAAGGGTCTTATGTTCACTTCTTTCATTAGCTGCAACATATTCTCAAAATGAACTCCCATACCATGCAATTCATGAAGAGGTTATTGGCAATGACCGTTTATTTTTTGGTCATGCAATGTATTCTCAAGAACTTGGGTCGTTATCTGGTGTTATACTTAATAACATAGTTGATACTATTGCACAAGAATCTTCACAGTCTGCACGAGGGAAGTTGGCACTTGAAGCTTGCAACTGTATTGCTTCATATTTTAAGGTGAATCACGAGATATCATCTGTATGTTCTAAGTTGATGGAGACCGCCAAATCATGTCTTGGAGCTGATGACAGATATCTGCAGTCGACAATTCATTTTGTGCATAAACAGTCCCCGGTGTCTGTCGGGGGAGATTGA | 2721 | 39.4 | MEFKARDYRNEDELYLLKPLSVTSHPLSSIASPDNQDRGSIEFFDPLRGISNEPVEDIAVAEKPATSQATSHHSAKEWASFNKLLMQRFPVPKQISVSALSSKTIKRKKVIGELQPNKRSDELNESQKLTEGGLKTVSQQEYIRRLHELKDEIRRSWNSDDRVTSLNLSIKVAKLLMDTSVAQFYPTLFVLATDILDMLGDLVWDRIKEKAEFADNGTRTCTLSDDFEANNICIEARETCSNWFRKIASIQELLPRIYLELAIFPCWRFLDDHVMDKLMRLVMMIRGIADPLASAYCRFFLIHCAQKLPNCDTGYLISCISDQKIVLTRIVSMKETKYGNFLGDQKLLISLMEPTIEYTMRCIFKDPNQVGDMIVNLDLGKNPSELTGKAPWISIFLYYLLREIPTEIVCSSALEFLHLVDCSSDCSFDQCLNYKMLGFKLCEGISQVNTVDAVINEVIQVATRRKSLNEYLKILDAYMDIILQYKMDEYLSSVLGEIFERVCNEMVTEDELASLQSIIVKLVTHFDDMKYVFDLNYFVDILDVMHGSSRSIVCMNILTIATRNDRIDDPTTVKLLFDVAQSLHDSVDFSSTKQDDNQQAERLISRFVDKVDHGTDLDRHFTFLVECRGTFSSMNDLKELLVHSSNLLATRASREKKDNISFIKSCITFNEVTIPCIPSYSRQLILYLETAEVSLFGGLISHSDGLLDSAVSCLQDLLVDGSRKSNEDADGIASLMRKLCGFILLVPGNSEQGVTYIPKSILSLLDSQSWITPKLRIRVLCSLLSLAATYSQNELPYHAIHEEVIGNDRLFFGHAMYSQELGSLSGVILNNIVDTIAQESSQSARGKLALEACNCIASYFKVNHEISSVCSKLMETAKSCLGADDRYLQSTIHFVHKQSPVSVGGD | 906 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g02071 | 906 | PANTHER | ESOPHAGEAL CANCER ASSOCIATED PROTEIN | 2 | 898 | IPR029705 | GO:0005768(PANTHER)|GO:0032456(InterPro)|GO:0032456(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g02071 | K25731 | VPS35 endosomal protein-sorting factor-like |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:312483863 | Cind7g03687 | Cind-Chr7:229526421 | dispersed |