Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g02098 | ATGGCCAAAAGCTCCTTCAAATTGGAACATCCACTAGAGAGGCGACAAGCTGAGGCTGCTCGTATCAGGGAGAAGTATCCCGACAGAATTCCGGTTATTGTGGAGAAGGCTGAGAGAACCGACATACCTGACATTGACAAGAAAAAATATCTGGTTCCTGCTGATCTGACAGTTGGACAGTTTGTGTATGTTGTGAGAAAGAGGATTAAGCTGAGTGCAGAAAAGGCCATCTTTATCTTTGTCAAGAACATCCTGCCACCTACTGCTGCAATGATGTCTGCTATATACGAAGAAAACAAAGACGAAGATGGTTTTCTTTACATGACTTACAGTGGGGAGAATACGTTTGGATTACTTTGA | 360 | 43.06 | MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLL | 119 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g02098 | 119 | Gene3D | - | 1 | 118 | - | - | |
| Cind3g02098 | 119 | SUPERFAMILY | Ubiquitin-like | 3 | 117 | IPR029071 | - | |
| Cind3g02098 | 119 | FunFam | Autophagy-related protein | 1 | 117 | - | - | |
| Cind3g02098 | 119 | Pfam | Autophagy protein Atg8 ubiquitin like | 14 | 117 | IPR004241 | - | |
| Cind3g02098 | 119 | CDD | Ubl-ATG8 | 12 | 114 | - | - | |
| Cind3g02098 | 119 | PANTHER | MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED | 3 | 117 | IPR004241 | GO:0006995(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g02098 | K08341 | GABA(A) receptor-associated protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 67637 | Cind2g01445 | Cind3g02098 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr2:341587656 | Cind3g02098 | Cind-Chr3:313824904 | dispersed | |
| Cind | Cind-Chr3:313824904 | Cind6g02480 | Cind-Chr6:133039459 | dispersed |