AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02115 ATGGTTAAACATCAAAACATAAGCATTACACTTAGGTTTCAATTTCGATCTGTTATAACCCCAACGATAAATGCTTTAGATCTTTTTAACAAAAAGTTGAATAATTTGTCTTATTTGCCGAAAATGGACCCAATGAACCAAGAAGTAAGTCCCGATGCCTCACTAACTGCTCCGGAAAAGCGAAAACGTGGTCGCCCACGAAAAGATCCAAGTGAAAGACGAGCACAAAAAGCTCGTTCACGTGCTGCTGCTGACATGTCACCTGGCTTTGTACAGTCGACCAGCAAACCTAAGAGAGTTGATCCAATCAATGACCCAACTGAAGTCATAATCGGACAGGTCGTCACTGGTGTTGTCGAGGCAACTTTTGATGCTGGTTTCCTACTTGCTGTTAGGATCGGGAACTCAAAGATCACACTAAGAGGCGCGGTTTTCAAACCAGGACAAGCTGCTCCTGTGACGCCAGAAAATGACGTGGCACCTAATGCTGAAATGATCAAACGAACTGAAGTTCCTTTCCCATCAGAACTTCAACCTAAACGCAGGCGTAGACGATCAAAAGAAAAAAGCATGCAGCTTGTTACATATACCGGGAACGATAATAATTCACCAACAAAAGGAAACTATGCTTTATCCCCATCAGTTCCGCAAGTTGGTGCGAGAGGCACCGTGGTCCCAGTTGTTCTCCAACCGATCAACTTATCAAACGGTTTATCAACCAATCAACCCGCTCCTCATTTGCGGACCACACAAGGGAAGCCGGTGCACTCGGTTTTGCCGTTGGCGGTTTACCCGCCGAATGGTTCAATGGGTCATGCATCTGAGTCTCAAACTAGCTCACAGTTTACTGTTACACCCACTGGGTCCGGAAATGAAAATGCTTCTTTTAAACAAGGTGATGGGGGTAATCAGCCAATAAAAGCAACTGATGGAATTGTGAAAATGGAATCAGACATTGGTGATATGAACGAGCCTCTTTTTATTGAACCTTTGCAAACTCGACACACGGTTCATCATTTTCAGTCTCCACCGGGATTGGGACCTATGATGCACAGTGGACCCGGAAAAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAATGTTGGTGACGAACAGGGCCCTCGAAATGGACATCAAAATGCAGGTTATAATGTAGGTCTTAACAGAGATGAAGAAACTGGTCAGTCAGGGAAGATGTAA 1200 44.67 MVKHQNISITLRFQFRSVITPTINALDLFNKKLNNLSYLPKMDPMNQEVSPDASLTAPEKRKRGRPRKDPSERRAQKARSRAAADMSPGFVQSTSKPKRVDPINDPTEVIIGQVVTGVVEATFDAGFLLAVRIGNSKITLRGAVFKPGQAAPVTPENDVAPNAEMIKRTEVPFPSELQPKRRRRRSKEKSMQLVTYTGNDNNSPTKGNYALSPSVPQVGARGTVVPVVLQPINLSNGLSTNQPAPHLRTTQGKPVHSVLPLAVYPPNGSMGHASESQTSSQFTVTPTGSGNENASFKQGDGGNQPIKATDGIVKMESDIGDMNEPLFIEPLQTRHTVHHFQSPPGLGPMMHSGPGKMTELLQAVQQNVGDEQGPRNGHQNAGYNVGLNRDEETGQSGKM 399
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02115 399 MobiDBLite consensus disorder prediction 270 302 - -
Cind3g02115 399 MobiDBLite consensus disorder prediction 170 206 - -
Cind3g02115 399 MobiDBLite consensus disorder prediction 369 399 - -
Cind3g02115 399 MobiDBLite consensus disorder prediction 369 383 - -
Cind3g02115 399 MobiDBLite consensus disorder prediction 267 306 - -
Cind3g02115 399 MobiDBLite consensus disorder prediction 42 102 - -
Cind3g02115 399 MobiDBLite consensus disorder prediction 55 80 - -
Cind3g02115 399 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 42 383 IPR045881 -
Cind3g02115 399 MobiDBLite consensus disorder prediction 191 206 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02115 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1729748 Cind Cind3g02115 Cind-Chr3:314823871 Cind6g04078 Cind-Chr6:168712084