AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02116 ATGAATGATGCCTTGTTATTAACAACTATGTGTCTCATTGGTTTATCTGTTGATGTTCATATTAAAGATGGCTCTGTTTATTCTGGCATTTTTCATACTGTTTCTGTTAATGATCCCTATGCTATCGTGTTGAAGCAAGCAAGGATGACCAAGAAAGGGAAATGCAGTTCAAATGTGGCCAATGAGGAGGTGATAGCCACACTAATTATCCAGTCAGAAGATCTTGTTCAAGTTGTTGCCAAGAGAGAGATGCTTCCAGCAGATGGTTTTGTTGGACATGAAACTGGGGACGTTACAGGGGCTGTTGCTTGCACCTTTCCGTCTAATGGGAACCCATTGAAAGAAACAAACAAAATGACTAACAAGTCAAATGTTGGTCAACCACATACCAATAAAACAAAAGGCTCGTCTGGAACTGAGAACGGGTTAGCTAATGGATTAAAACCTGATATCGCTGTTCAGTCAACCAATGCTCTCCATGTAAATAAAAATGCAGACACTGTTCCTTCACCTTCTGCCACCGTCTCTTCATCAACTCCATGTGAGGCCGTCACTACAAAAGTCTCAACTTCTAATCGAGCTCCTAAGGAATTTAAACTTAATCCGGGAGCAAAGACATTTTCTCCATCATTTCCAAATAAAAGATCAGCAACCCCTCAAGCAATACCATCCAGTGCAAATCTCGCATACATCCCCGACAATTATCATGTGGGTCCGGTTGCTAGTCCACAGCCGGAATTTGCAATCAACCCGTATGCTCCTCGGTCAGTGCCTGCTAAGTTTGTTCCATATGGAGGCAACGATGTACAACATCCTCCCCCTATTCTTGGATATAGGAGTCAACCAGTTAGAAATGGTGCACAATATCATCTTCCGGTTCAAACGGCACCTGCTTATGTCCAGCCAAGCCCCCAGAATGTTATGGTTGGAAGATTGGGACCGGTTGTGTATGTTCATCCAGTTTCTCAAGACATGGTCCCGGGCACAAATGGCTTCCCTCAAATGTCTACTTGCTCTATTTTAACTCCACATCAAGTCCATCATGTCCCTAAACACCAAGGAAATGCAACAGCTCAAGCTTTACAGCTATGTGCACCTCCTTCGTTTATAGGAGGTGGTGGTCACCCACCGTTTGTTATGCCAACTCACATTCCGATTTCACAACCGTCTTATCCTATGATCCGTCCAATCTCGGTCCCGGGGTCTAACGGCTTCTTTGTATCAAAGTTTTCTTGA 1236 43.69 MNDALLLTTMCLIGLSVDVHIKDGSVYSGIFHTVSVNDPYAIVLKQARMTKKGKCSSNVANEEVIATLIIQSEDLVQVVAKREMLPADGFVGHETGDVTGAVACTFPSNGNPLKETNKMTNKSNVGQPHTNKTKGSSGTENGLANGLKPDIAVQSTNALHVNKNADTVPSPSATVSSSTPCEAVTTKVSTSNRAPKEFKLNPGAKTFSPSFPNKRSATPQAIPSSANLAYIPDNYHVGPVASPQPEFAINPYAPRSVPAKFVPYGGNDVQHPPPILGYRSQPVRNGAQYHLPVQTAPAYVQPSPQNVMVGRLGPVVYVHPVSQDMVPGTNGFPQMSTCSILTPHQVHHVPKHQGNATAQALQLCAPPSFIGGGGHPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKFS 411
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02116 411 PANTHER ATAXIN 2-RELATED 124 385 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Cind3g02116 411 MobiDBLite consensus disorder prediction 109 144 - -
Cind3g02116 411 Pfam Ataxin 2 SM domain 2 81 IPR025852 -
Cind3g02116 411 MobiDBLite consensus disorder prediction 195 219 - -
Cind3g02116 411 MobiDBLite consensus disorder prediction 109 143 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02116 - -