AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02121 ATGAAACCCAAACATTCATCATCATCAGCGTCCTTCATTTCCAAAACCCTTATAATAACACTAATCATCACCTTTATATACACTAGAAACATTCCAAAAGTAGAAGGTTTTAAAGCACCAGTTGACCCACTAGACATACTCCCACTTTTGCCCAGACAAGTTTCATGGCCTATTCTGAATAAGCTTCGAAGCGCTGTCGATTTGCTTCCGAGCTTTGTTGGCTCCGCTTCGATAGCGAATAATTCGGGTCTGAGTTGGAAAGGGTCTTGTTTTTACCAGAATAGTGCTTGGTTGGAACTTCATAATAAAACTGGGAGTCAGTTTGGTGGTGGCACTCTTCATATTAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTGACATGGGACTATTATTTTATATCCCGTGAGCATACGCTTGAGTTCGATGAGTGGTCTGAGAAAGCTGAGTATGAATACGTAAAACGTAAGGGAGTTGCCATTTTCCTAATGCAAGCAGGGATGATAGGGACCCTAGAAGCATTGTGGGAGGTATTTCCCCTGTTTTCAAACACCGGATGGGGCGAGAATTCTAATCTTGCTTTTCTTACAAAACATATGGGAGCTAACTTTGAAGCACGTCCTGAGCCGTGGGTTACAAATATTACTGTTGATGATATACATTCTGGAGACTTTCTTGCAATATCAAAAATTCGTGGTAGATGGGGTGGGTTCGAGACACTCGAGAAATGGGTATCTGGGGCATATGCTGGTCATTCCGCTGTTTGCTTAAGGGATCCTCAAGGAAAACTATGGGTTGGGGAATCGGGGCATGAAGATGAAGAGGGTCAAGATGTTATTGCTCTGTTGCCTTGGGATGAGTGGTGGAACTTTGAGTTAACAGAAGATGATTCTAATCCTCATATTGCTCTACTTCCTTTGCATCCTGACCTTCGAGCTAAATTTAACGAGACTGCTGCATGGGAGTATGCCCAAAGCATGATTGGCTTACCATACGGTTATCACAATTTGATATTTAGCTGGATAGACACTATCAGTGATAATTTCCCTCCACCATTGGATGCTAATCTGGTTGCATCTGTTATGACCGTGTGGAATCAAATGCAGCCTGCATATGCTGCTAACATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACTAAGGGGCTCGAGCTTCCTGATATTTTAGTCGAAGTTGAAAGACGTGGTTCATCTTTTGCTGAACTATTGACCATACCGGAACAGGATGACTGGATATATGCTGACGGAAAGTCAACTTCTTGTGTTGCTTTCGTCCTAGAAATGTACAAGGAAGCAGGACTATTTGGAGATCTCTCTGACGAAATTCAAGTTACTGAATTCACTATTAAGGACGCTTACACGCTTAACTTCTATGAAAACAATTCGAGTCGCCTGCCAAAGTGGTGTAATGAAGGAGACACTGTTGAGCTTCCATTTTGTCAAATCAAAGGAAAGTATCGAATGGAACTACCTGGATACAATACCATTGAACCGTATCCTCATATGACTGAACATTGCCCTTCACTGCCCCCTGACTATTCAAGGCCTGATTACTGCTGA 1611 42.4 MKPKHSSSSASFISKTLIITLIITFIYTRNIPKVEGFKAPVDPLDILPLLPRQVSWPILNKLRSAVDLLPSFVGSASIANNSGLSWKGSCFYQNSAWLELHNKTGSQFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWSEKAEYEYVKRKGVAIFLMQAGMIGTLEALWEVFPLFSNTGWGENSNLAFLTKHMGANFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDSNPHIALLPLHPDLRAKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNFPPPLDANLVASVMTVWNQMQPAYAANMWNEALNKRLGTKGLELPDILVEVERRGSSFAELLTIPEQDDWIYADGKSTSCVAFVLEMYKEAGLFGDLSDEIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIEPYPHMTEHCPSLPPDYSRPDYC 536
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02121 536 PANTHER OS01G0793500 PROTEIN 15 536 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02121 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
67798 Cind2g06122 Cind3g02121
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1729753 Cind Cind3g02121 Cind-Chr3:314988921 Cind7g03667 Cind-Chr7:228571766
1765324 Cind Cind1g04928 Cind-Chr1:404624184 Cind3g02121 Cind-Chr3:314988921
1777130 Cind Cind1g00548 Cind-Chr1:36472303 Cind3g02121 Cind-Chr3:314988921
1779285 Cind Cind2g06122 Cind-Chr2:338889657 Cind3g02121 Cind-Chr3:314988921