Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g02124 | ATGATAAAATTGATAAAACAGCTTCGGATTTCATTCGGTGCTCCGTTTCTTTGGCTCGTTTGCTTGATTTACTTCACACAGGGTTTTAGATCTTTTGTTTGGACCGCAGTTTCATACCAGCTAAAAGACAGATTAAAGCTATCGCCTTCTGCTTCTCAGTTTGTAACATCCATATCTTTTTTTCCATGGAGCATAAAACCAATATACGGAATTATATCAGATTGTATCCCAGTGTATGGAAAGAAAAGAGTTCCTTATTTAGTCATTGCGACACTGCTTTCACTCTTCCCATGGGTAATTCTTGGCATTCAGGAATCCGCAAGAAGTTCTAAACGTCAACTCATGATCTTCTTGTTAATTCAAAATCTAGGATCTGCAATGTCAGATGTTGTGATTGATGCAATGATTGCAGAAGCAGCAAGGCACGAAAAGGCCAAGTATGCTGGCGACTTGCAATCACTATCTTGGATGACAATGGCTTTAGGGGGGATCTGTGGGAGTTTGTTTGGAGGATATGCACTAAATAGCATTCAAATGGGCCACATCTTTTTGCTTTTTTCTTTTTTACCAACTGTACAACTATTTTCATGTGGTTTTGTGACTGAGATTCCAATAAGCAGTCCACAACTGCCAGAATTTTCTACTTCAAATGATCCCGACACACATAATGGAAGTCTACCAGATGAAAGTAGATTATCATTCGGATCACCTAGATCTCCTAAATCACCTAAAGCCGGTACTTTGATGAGAAAGAGGAGCCATAAAAGTAGCAAGAAAGAAATTTTGGATATAAGCAGAATTCAGATTCTTGAAGAAGATGAATCTTTGCCATTACACTGGTTTCGGTCTTTGAAAATGGCTGGTTATTCTTTGTTCAAAGCTTTTCGACGCCCGATTATCCTGAGACCAATGGCTTGGTTTTTCCTAGCGCAGGTAACAATTCCAAACCTCTCAACAGTCATGTTCTACTACCAGACAGAAGTTCTTAATCTAGACGCTTCCTTTTTGGGTACTGCTCGTGTCATTGGGTGGATAGGCCTCATGCTTGGAACTTTCACTTATAATCGCTTTTTAAAGAAGATCAAGTTGAGAAAGATTCTTATGTTGTCTCATGTTACTTTGTCAATCTCAACACTTATAGACATTGTATTGGTTTATAGAGTAAATCTTTCGTTTGGCATATCCGATGAAATAATGGTGTTGTTTGGGTCTGCTCTATCGGATGCAGTCCATCAATTCAAGTTCATGCCTTTCCTGATCCTTTCTGGACAACTCTGCCCGCCTGGAATAGAAGGGACACTATTTGCCCTCTTCATGTCGATAAACAACTTTGGGTCCACAATGAGTTCAGTAGTTGGTGCTGGTTTGGCTTCAGTTCTAGACATATCTTCGGGTTCTTTTGATAATCTTAGTCTTGGAATTAGCATTCAAGTCATCTGCACATTTATACCGGTTGTTTTCCTGTTTTTAATACCAAAGGATGCTACAGGGATATCAACATAA | 1503 | 39.19 | MIKLIKQLRISFGAPFLWLVCLIYFTQGFRSFVWTAVSYQLKDRLKLSPSASQFVTSISFFPWSIKPIYGIISDCIPVYGKKRVPYLVIATLLSLFPWVILGIQESARSSKRQLMIFLLIQNLGSAMSDVVIDAMIAEAARHEKAKYAGDLQSLSWMTMALGGICGSLFGGYALNSIQMGHIFLLFSFLPTVQLFSCGFVTEIPISSPQLPEFSTSNDPDTHNGSLPDESRLSFGSPRSPKSPKAGTLMRKRSHKSSKKEILDISRIQILEEDESLPLHWFRSLKMAGYSLFKAFRRPIILRPMAWFFLAQVTIPNLSTVMFYYQTEVLNLDASFLGTARVIGWIGLMLGTFTYNRFLKKIKLRKILMLSHVTLSISTLIDIVLVYRVNLSFGISDEIMVLFGSALSDAVHQFKFMPFLILSGQLCPPGIEGTLFALFMSINNFGSTMSSVVGAGLASVLDISSGSFDNLSLGISIQVICTFIPVVFLFLIPKDATGIST | 500 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g02124 | 500 | CDD | MFS-FBT | 18 | 489 | - | - | |
| Cind3g02124 | 500 | Gene3D | MFS general substrate transporter like domains | 15 | 491 | IPR036259 | - | |
| Cind3g02124 | 500 | PANTHER | FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC | 6 | 495 | IPR039309 | - | |
| Cind3g02124 | 500 | NCBIfam | folate-biopterin family MFS transporter | 19 | 493 | IPR004324 | GO:0016020(InterPro) | |
| Cind3g02124 | 500 | MobiDBLite | consensus disorder prediction | 210 | 237 | - | - | |
| Cind3g02124 | 500 | Pfam | BT1 family | 27 | 493 | IPR039309 | - | |
| Cind3g02124 | 500 | MobiDBLite | consensus disorder prediction | 210 | 254 | - | - | |
| Cind3g02124 | 500 | SUPERFAMILY | MFS general substrate transporter | 17 | 493 | IPR036259 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g02124 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1718239 | Cind | Cind1g02875 | Cind-Chr1:344300641 | Cind3g02124 | Cind-Chr3:315212382 | |
| 1729755 | Cind | Cind3g02124 | Cind-Chr3:315212382 | Cind6g00838 | Cind-Chr6:211970019 |