Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g02142	ATGAATATTTGTAGAAAAGATCCAGGATTACCAACTGATTCATTTTATGAGATTAGAGCTGGATGTACTGATGTTCAAGAAACCAAATTTAGAATCAAGGCTGGAAAGACGTTAAGTGTAAAAAGGTGGCGGGCTTCATTTACACCTGAGGGTTCGCTTGATATTGGCAAATGCCTTAATCGAATATGTCGGGGAGGGATTCATCCATCAATTAGAGGAGAAGTGTGGGAATTTCTGCTTGGTTGTTATGATCCTAAAAGCACATTTGATGAACGAGAACAGATACGACAAAGACGGAGGGATCAATATGCTCAGTTAAAAGAATCGTGCAGTGATATGTTTCCTGTTGTTGGAAGTGGCAAGTTCATCACTGCACGCGTGATCACAGCAAATGGTGATCCAATCCAGGACCCAACAGTGCTTCTAGGAACAGATCTTGAACAGCTTCCAACACCGGAATCTCAAGAAAGTGCTGATCTGATTCCAGTCACAGTGGGTTCTCGAGAGCATGATAAAGAAATAATTCAGTGGAAGCTTGCTCTACATCAAATAGGTCTGGATGTAGTTCGCACGGACAGGACGTTAATGTTTTATGAGAAGCAAGAGAATCTGGCAAAACTTTGGGATGTTCTTGCTGTCTATGCTTGGCATGATAAAGACGTTGGTTATGGCCAAGGTATGAGTGATCTTTGCTCTCCCATGATTATGCTTCTAGAAAATGAAGCAGATGCATTTTGGTGCTTTGAACGTTTAATGCGTAGAGTGCGAGGGAATTTCAGGTGCACAGGGAACTCGGTGGGGGTAGAGGCACAGCTTGAAAACTTGGCTAATGTCACTAAAGTTGTTTATCCTAAACTTCACCAGCATTTAGAACACCTTGGTGGAGGTGGTTACCTGTTTGCGTTTCGGATGCTAATGGTTTTGTTCCGGCGAGAATATTCCTTTGGAGATTCATTAGTCTTGTGGGAGATGATGTGGGCTTTAGAGTATGATCCAGAACTATTCTCATTATACGAAGGAGGTGAAACACAAAACAAATATGATGTTTACAAAGCAACCCGAAAATCCAGACGCCAATATGGCAAGTACGTAAGAGCAAACAGAAGAAGTAGGGCCCGTGCCAGAGGAGAACCTTCCGCACCACTACCTATTTCTGTTTTCGTTCTAGCAAGTGTCCTCAAGGACAGGAGCGACAAGTTATTAAAAGAAGCTAGGGGACTAGATGACGTTGTAAAGATATTGAATGACATCTCTGGAAATATGGATGCCAAGAAAGCTTGCACAGGGGCCATGAAGATTCACAAGAAGTATTAA	1314	42.39	MNICRKDPGLPTDSFYEIRAGCTDVQETKFRIKAGKTLSVKRWRASFTPEGSLDIGKCLNRICRGGIHPSIRGEVWEFLLGCYDPKSTFDEREQIRQRRRDQYAQLKESCSDMFPVVGSGKFITARVITANGDPIQDPTVLLGTDLEQLPTPESQESADLIPVTVGSREHDKEIIQWKLALHQIGLDVVRTDRTLMFYEKQENLAKLWDVLAVYAWHDKDVGYGQGMSDLCSPMIMLLENEADAFWCFERLMRRVRGNFRCTGNSVGVEAQLENLANVTKVVYPKLHQHLEHLGGGGYLFAFRMLMVLFRREYSFGDSLVLWEMMWALEYDPELFSLYEGGETQNKYDVYKATRKSRRQYGKYVRANRRSRARARGEPSAPLPISVFVLASVLKDRSDKLLKEARGLDDVVKILNDISGNMDAKKACTGAMKIHKKY	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g02142	437	FunFam	TBC1 domain family member 15-like	163	259	-	-
	Cind3g02142	437	Gene3D	-	265	437	-	-
	Cind3g02142	437	Pfam	Rab-GTPase-TBC domain	168	330	IPR000195	-
	Cind3g02142	437	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	267	437	IPR035969	-
	Cind3g02142	437	SMART	tbc-4	63	354	IPR000195	-
	Cind3g02142	437	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	57	416	-	GO:0005096(PANTHER)\|GO:0090630(PANTHER)
	Cind3g02142	437	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	167	259	-	-
	Cind3g02142	437	ProSiteProfiles	TBC-rab GAP domain profile.	66	329	IPR000195	-
	Cind3g02142	437	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	54	289	IPR035969	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g02142	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	67196	Cind1g01781	Cind3g02142

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1729768	Cind	Cind3g02142	Cind-Chr3:316430106	Cind8g03414	Cind-Chr8:77432312
	1771881	Cind	Cind5g03968	Cind-Chr5:100829333	Cind3g02142	Cind-Chr3:316430106
	1776500	Cind	Cind9g02246	Cind-Chr9:248867446	Cind3g02142	Cind-Chr3:316430106
	1778253	Cind	Cind1g01781	Cind-Chr1:372400203	Cind3g02142	Cind-Chr3:316430106