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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02403 ATGGTTGGTTATTTAATAGGTCCACCTTTATATTGGCATCTTCTTGAAGCCCTTCATCGCTCTTCTGTTGCTGCTGTTTCTTGCCCTGTTTGCAACTGTGATTGTGATTCTCAACCTCTTCTTTCCATTCCTCAAGCGCTAAGCAACGGTTCCTTCACAGATTGTGCAAAGCATGATCCTGAAGTAAGTGGAGACACAGAAAAGAATTTCGTAGAGCTTCTCTCTGAAGAATTGAAGCTACGTGAAGCCGAAGCTTTAGAAAGTCAACAACGTGCTGACATGGCACTTCTCGAGGCCAAGAAGTTAACATCCCAATATCAAAAAGAAGCAGACAAGTGTAATTCAGGAATGGAAACTTGTGAAGAAGCTCGTGAAAAAGCCGAAGCAGCTTTACTAGCACAAAAACAACAAAGTGAAATGTGGGAATTAAGAGCCAAACAAAGAGGTTGGAAAGAAGGCAGTACTAAGTCTGTAAACACTGCTTGA 486 41.77 MVGYLIGPPLYWHLLEALHRSSVAAVSCPVCNCDCDSQPLLSIPQALSNGSFTDCAKHDPEVSGDTEKNFVELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALLAQKQQSEMWELRAKQRGWKEGSTKSVNTA 161
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02403 161 Coils Coil 80 100 - -
Cind3g02403 161 PANTHER EXPRESSED PROTEIN 2 158 - -
Cind3g02403 161 Pfam Protein of unknown function (DUF1068) 1 153 IPR010471 -
Cind3g02403 161 Coils Coil 117 137 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02403 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
67289 Cind1g03045 Cind3g02403
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:350557565 Cind3g05236 Cind-Chr3:163634617 dispersed
Cind Cind-Chr1:349190082 Cind3g02403 Cind-Chr3:350557565 wgd