Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g02585 | ATGGCATTTCGTCACACTGGGTCCACCACAAACCAATGGGTTGCATGGGCCTTAAATATTGGCGGGTCAGGTATGCTTGGTGCACAAGCCCTTGTAGCAGTAACAAGCTCAAACGGGTCAGTTGATGCTTATACTAGTGCTGTAACAAGTTTTGGTACTACTTTACAAAGGAGCACTTTAAGCTTTGAAGTGCCAGTGATTAGAGCTGAGAGAATTAATGGAGATGTGGTTATTTATGCAACGTTGGTTTTGCCAAGTGGAGGGACGAGATTTAATCAAGTGTGGCAAGTGGGTCCGGTTAATAATGGAGCTCCGGGTATACATGGGTTGGGTAATGATAATAGGAACTCGGTTGGGTCGGTTGACTTTAGTACTGGTCAAACTGGTGGTGGTGGTAGTGTTGGTGGATCACGGATGCGAAGGAGGAATACTCATGGAGTATTAAACGCTGTTAGTTGGGGAGTATTGATGCCTATGGGAGCAATGACAGCAAGATATTTAAAGGTGTTTAAAGTAGCTAATCCAGCCTGGTTCTATATCCATGCTGCTTGCCAAACATCAGCCTATGGCGTAGGTGTAGCGGGATGGGCCACTGGACTAAAGCTAGGCAGTGACTCAGCCGGAATCACTCACACGAGTCATCGCAACATTGGAATCATCCTCTTTTCACTTGGAACACTTCAGGTTTTCGCTTTGCTGTTGAGGCCTAAGCCAGACAACAAGTACAGATTTTATTGGAACATATACCACCATGGCCTTGGATACTCGGTGATCATCTTGAGCATTATCAACGTCTACGAGGGACTTGATATCTTGGACCCTGAGAAGAAGTGGAAGCACGCCTACACCGGCATACTTATATCTTTGGGGGCTATCACGGTTCTGTTAGAAGCTTTGACATGGTTCATCGTTTTGAAGAGGAAGAAGGAAGACAAAAGGACACATGCAGGGACTAATGGTTCATATGGAGCCAATGGATCTGCGTAG | 987 | 45.8 | MAFRHTGSTTNQWVAWALNIGGSGMLGAQALVAVTSSNGSVDAYTSAVTSFGTTLQRSTLSFEVPVIRAERINGDVVIYATLVLPSGGTRFNQVWQVGPVNNGAPGIHGLGNDNRNSVGSVDFSTGQTGGGGSVGGSRMRRRNTHGVLNAVSWGVLMPMGAMTARYLKVFKVANPAWFYIHAACQTSAYGVGVAGWATGLKLGSDSAGITHTSHRNIGIILFSLGTLQVFALLLRPKPDNKYRFYWNIYHHGLGYSVIILSIINVYEGLDILDPEKKWKHAYTGILISLGAITVLLEALTWFIVLKRKKEDKRTHAGTNGSYGANGSA | 328 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g02585 | 328 | SMART | 561-7 | 144 | 269 | IPR006593 | - | |
| Cind3g02585 | 328 | Pfam | Protein of unknown function (DUF568) | 25 | 123 | IPR045265 | - | |
| Cind3g02585 | 328 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 123 | 313 | - | - | |
| Cind3g02585 | 328 | Gene3D | - | 123 | 315 | - | - | |
| Cind3g02585 | 328 | CDD | Cyt-b561-FRRS1-like | 120 | 298 | - | - | |
| Cind3g02585 | 328 | PIRSF | UCP037471 | 1 | 327 | IPR017214 | - | |
| Cind3g02585 | 328 | Pfam | Eukaryotic cytochrome b561 | 145 | 269 | IPR006593 | - | |
| Cind3g02585 | 328 | ProSiteProfiles | Cytochrome b561 domain profile. | 104 | 305 | IPR006593 | - | |
| Cind3g02585 | 328 | ProSiteProfiles | DOMON domain profile. | 1 | 98 | IPR005018 | - | |
| Cind3g02585 | 328 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 2 | 309 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g02585 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 67366 | Cind1g04007 | Cind3g02585 | |
| 67367 | Cind1g04010 | Cind3g02585 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr1:4413412 | Cind3g02585 | Cind-Chr3:344937492 | dispersed | |
| Cind | Cind-Chr1:352533176 | Cind3g02585 | Cind-Chr3:344937492 | dispersed | |
| Cind | Cind-Chr2:240299334 | Cind3g02585 | Cind-Chr3:344937492 | dispersed | |
| Cind | Cind-Chr3:354789821 | Cind3g02585 | Cind-Chr3:344937492 | dispersed | |
| Cind | Cind-Chr3:344937492 | Cind8g02132 | Cind-Chr8:247845234 | dispersed | |
| Cind | Cind-Chr8:51166098 | Cind3g02585 | Cind-Chr3:344937492 | transposed | |
| Cind | Cind-Chr8:118371941 | Cind3g02585 | Cind-Chr3:344937492 | transposed | |
| Cind | Cind-Chr1:352386305 | Cind3g02585 | Cind-Chr3:344937492 | wgd |