Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g02592 | ATGTCTCTGACAAATACACAAACTCAAACTGATCTTGATCTGATGACTATGAAGCAGAAGCCAGTTCGTAGTTCAGGTGAGATTCATGTGATTGTGGGACCCATGTTTGCTGGCAAAACAACTGCTCTTCTTCGTAGGATTAAATCTGAAGCAACTAATGGAAGGAATATAGCAATGATAAAGTCGAGTAAGGATAATCGATACGCGATAGATTCAGTTGTGACGCATGATGGAACAAAATATCCTTGTTGGGCACTTCCTGATTTGTTGTCTTTTAAACAAAGACTTGGGGAAGAAGCTTATGAAAAGCTGGATGTTATTGGGATTGATGAGGCACAATTCTTTGATGATCTCTATGACTTCTGTTCTAAAGCTGCTGATCATGATGGTAAAACTGTCATAATTGCTGGTCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCGGTTCTTGATATAGTACCACTTGCTGATACCATAACCAAGTTGACTGCTCGATGTGAATTATGTGGTAAACGAGCTCATTTCACTTTTAGGAAGACCAGCGAGACAAAAACAGAACTTATTGGCGGGGCGGATATGTATATGCCTGTCTGTCGTCAACATTATGTTAGCGGACAAACGGTGATAAAAAACACCAGACAAACAACCTCAACTACCAGTGCTTAA | 669 | 39.91 | MSLTNTQTQTDLDLMTMKQKPVRSSGEIHVIVGPMFAGKTTALLRRIKSEATNGRNIAMIKSSKDNRYAIDSVVTHDGTKYPCWALPDLLSFKQRLGEEAYEKLDVIGIDEAQFFDDLYDFCSKAADHDGKTVIIAGLDGDYLRRNFGPVLDIVPLADTITKLTARCELCGKRAHFTFRKTSETKTELIGGADMYMPVCRQHYVSGQTVIKNTRQTTSTTSA | 222 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g02592 | 222 | PANTHER | THYMIDINE KINASE | 18 | 217 | IPR001267 | GO:0004797(InterPro)|GO:0004797(PANTHER)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Cind3g02592 | 222 | ProSitePatterns | Thymidine kinase cellular-type signature. | 190 | 203 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Cind3g02592 | 222 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 164 | 206 | - | - | |
| Cind3g02592 | 222 | Gene3D | - | 164 | 205 | - | - | |
| Cind3g02592 | 222 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 26 | 164 | IPR027417 | - | |
| Cind3g02592 | 222 | FunFam | Thymidine kinase | 22 | 163 | - | - | |
| Cind3g02592 | 222 | Pfam | Thymidine kinase | 26 | 203 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Cind3g02592 | 222 | PIRSF | Tdk | 23 | 218 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Cind3g02592 | 222 | Gene3D | - | 19 | 163 | IPR027417 | - | |
| Cind3g02592 | 222 | FunFam | Thymidine kinase | 164 | 206 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g02592 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:344797841 | Cind5g02525 | Cind-Chr5:150564871 | dispersed |