Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g02778 | ATGATCCAAAACATTAAAGAGATCACAGGTAATAATTACAGTGAAGATGAGATTCACTCCATGCTTAAAGAATGTTCCATGGATCCAAATCAAACCACTCACAACCTTCTCTCAATGGATCCATTTCATGAAGTTAAAAGGAAGCGTGATCGCAAGAAGGAGAATGTGAATAAAGAATCTACAGAGCCCAGACAGAAACCTGGGATGCAGGGGCGGGGGAATAGAGGTGGTCGAGGGAACTACTCAGCACGTCACATTTCTCATGCAGGTGGTGGCAGGAACTCACTTCCTGCAAAAGAAAATGGAATCATTCAAGGTGTAGAGGATGGTCCAAATCAATCAATGTCTCAGAGTCAGAAGAAAAATGAGTCATTGGTTGCAAGCTCTTCTCGTGAGGGTGTACCTGATGGTTCGTCTGGTAAGAAGCAATCTGAAGCGTCTGCATCTACTGCAAGTAGTAAACTGGAGGGTCCACTGATACAGATCCCGCCTATCGAGGCAAGTAAGGGTCCCATTGTCGCTGTTGTGTTCGGGAGCACACATGGATCTCTTTCCAATAACATATCAGCTTCTGAGACACCACCAGCTTCACCAGGGGTCTTTCTCTCTGATTCAGATCCTATTCTGATGCCCTCACAAGATTCACGAATGCCTGTGGGTACAATCAGACGGGAAGTTTGGAGTCAGAAAACTCCAGTCGAACTAATTCATGAGACCCCACGTGAGATAAAGTCAACTGCTTATGGGTCTGAGGGTGGAAACTTTTCCATGCAAGGGAAGGCATCCGGTGGGCTTCAGGGAGTGGGGAAGAATATAAATTCGGATTCTTCACGACCAGGGTCATCTTCTCGTGTCTCCTTTTCTACTAGCAGGCCTTCTTCAAATCATAATAATAGGACGCAACAAGGGATTGGTCCTCAAAAAGCTGGGCCTAGTATGGAATGGAAACCGAAAGCGGTTAATCCTGTTCTTGCTCAAGGGACTGGGCCAGGTGAGTCAGTTAAGGTACCTGCGGTTCCAGTCGAAGATCACACTTCAACCCTGTCTGCATCCAACTATCTTGGGTCGCAGGATACTACTCATGAATTGGAGAAGAAGTTGGAGGAGTCACACATTTCAGATGTTCAACATGTTATTATCCCAGATCATCTCCATGTTCCAGAAGCCGAGAAACTCGGGTTCTGCTTTGGGAGTTTTGATCCCAGTTTCGGTTTTAATGCAAGCTCGTCAAATGGTCCCGTGAGTGATGTGAGTTCTGAGGCTTCTGAGGTGGTTGATGAAAGTATAGAGGAGCAACCCAGAAATCAAAATGAATTGGCAAGCGCTGATGAAGGATATCAACCTGACCGTCCAACATCCTCTAGTAACATGCCCGAGAGTTTATCAGTTGACGGTGATGTCTCATCAAATGTGACCCCTGAGTACCAAGAGTCCAAGCAAGAACTCCCAACTGCAGGCCATCAGTACCCTGTTCACTCATCACCTAATTTCAGCTTTGGCTTCATGCCACCAGTGATTGGGAACCAGCTTCAATCTTTTGAAAGCAACGAGTCTCAGGGACGTGACGGTTTCCATGTCCCAAGTCTTGTATTCTACCATTCTGGTGCTGATGGTGATGGTCGCATGTCACCCTTCCACTCAACTGGTCCTACCAAGTTCAATGGAAATGTTCCAATGTTATCATCTCAGGAGGTTGGGAACTCCTTAATGCTGTCTGCTGCTGGTCCAACACCCGTAGCTTCACAAACTGGTGCGGTTACACAAGGCTCTATAGCTGTGACTCAGCAACCATTGCCTGTGTTCAGGCAGCCAACCGGGTTCACCTGTCCCATTATCATCCAAATTTTATGCCTTATGAGTGAAGGTCCGGGTGTATGGTATGCCGCACCAGGCCGAGACATGTTCGGTTTACAGGCTAATTCTTTCCATAATCATTCACAAGGTGGTCAAGTTGCATACGGTGCACAAGCTGGACATGGTACATTTGCTGGTATGTATCACCCTGCACAACCAGTAACCACAGGAGCGATTCACCCTCATCTTCAACAGTCTGGAACCAGTGTTGACATGGTGGGACCCGCAGCTAGCGTGTATCAGCAACCACAAAACGCTCAAATGAATTGGCCTAACAACTACTGA | 2139 | 46.89 | MIQNIKEITGNNYSEDEIHSMLKECSMDPNQTTHNLLSMDPFHEVKRKRDRKKENVNKESTEPRQKPGMQGRGNRGGRGNYSARHISHAGGGRNSLPAKENGIIQGVEDGPNQSMSQSQKKNESLVASSSREGVPDGSSGKKQSEASASTASSKLEGPLIQIPPIEASKGPIVAVVFGSTHGSLSNNISASETPPASPGVFLSDSDPILMPSQDSRMPVGTIRREVWSQKTPVELIHETPREIKSTAYGSEGGNFSMQGKASGGLQGVGKNINSDSSRPGSSSRVSFSTSRPSSNHNNRTQQGIGPQKAGPSMEWKPKAVNPVLAQGTGPGESVKVPAVPVEDHTSTLSASNYLGSQDTTHELEKKLEESHISDVQHVIIPDHLHVPEAEKLGFCFGSFDPSFGFNASSSNGPVSDVSSEASEVVDESIEEQPRNQNELASADEGYQPDRPTSSSNMPESLSVDGDVSSNVTPEYQESKQELPTAGHQYPVHSSPNFSFGFMPPVIGNQLQSFESNESQGRDGFHVPSLVFYHSGADGDGRMSPFHSTGPTKFNGNVPMLSSQEVGNSLMLSAAGPTPVASQTGAVTQGSIAVTQQPLPVFRQPTGFTCPIIIQILCLMSEGPGVWYAAPGRDMFGLQANSFHNHSQGGQVAYGAQAGHGTFAGMYHPAQPVTTGAIHPHLQQSGTSVDMVGPAASVYQQPQNAQMNWPNNY | 712 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 246 | 315 | - | - | |
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 107 | 156 | - | - | |
| Cind3g02778 | 712 | Pfam | GBF-interacting protein 1 N-terminal | 1 | 54 | IPR009719 | - | |
| Cind3g02778 | 712 | SUPERFAMILY | UBA-like | 1 | 57 | IPR009060 | GO:0005515(InterPro) | |
| Cind3g02778 | 712 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 1 | 610 | IPR044277 | GO:0051082(PANTHER) | |
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 409 | 486 | - | - | |
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 249 | 307 | - | - | |
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 40 | 61 | - | - | |
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 434 | 486 | - | - | |
| Cind3g02778 | 712 | MobiDBLite | consensus disorder prediction | 27 | 156 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g02778 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:341515916 | Cind3g04528 | Cind-Chr3:28038305 | dispersed | |
| Cind | Cind-Chr2:367995885 | Cind3g02778 | Cind-Chr3:341515916 | transposed | |
| Cind | Cind-Chr3:299322210 | Cind3g02778 | Cind-Chr3:341515916 | transposed | |
| Cind | Cind-Chr9:157224112 | Cind3g02778 | Cind-Chr3:341515916 | transposed | |
| Cind | Cind-Chr1:357159774 | Cind3g02778 | Cind-Chr3:341515916 | wgd |