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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02805 ATGGCAAAGCAAAAGATTGTTGTGAAGGTGACAATGATGAACAACGACAAAAAATCTCGTAAGGCTCTGAAGATTGCCGTTGGTCTATGTGGAGTCGAATCAGCATCTTTGGTTGGATCAGACCAGATAACAGTGACGGGAGAAGGTATTGACTCGGTGAAATTGACGACTTTGCTAAGGAAAGGTGTAGGATACACAGAGTTAGTGAGTGTTGGTAACGTGGAAGAGAAGAAACCCGAAACGAAGCCAACCGCGGTGACATGGCAAATTAATCCTTACGACTATTACAATAGTTGGTATGGGATGCCACGATATTATGGTTATTAA 327 42.51 MAKQKIVVKVTMMNNDKKSRKALKIAVGLCGVESASLVGSDQITVTGEGIDSVKLTTLLRKGVGYTELVSVGNVEEKKPETKPTAVTWQINPYDYYNSWYGMPRYYGY 108
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02805 108 Gene3D - 1 77 - -
Cind3g02805 108 PANTHER OS04G0464100 PROTEIN 4 84 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02805 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:340347235 Cind3g02805 Cind-Chr3:340055292 dispersed
Cind Cind-Chr3:340326099 Cind3g02805 Cind-Chr3:340055292 dispersed
Cind Cind-Chr3:340055292 Cind3g02808 Cind-Chr3:340020645 dispersed
Cind Cind-Chr3:340055292 Cind3g02804 Cind-Chr3:340079297 tandem