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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g02809 ATGGCAAAGCAAAAGATTGTTGTGAAGGCGACCATGGAAAATGAACAGAAAAGTCTTAAGGCTAGGAAGATCGCGGTTAGTGTCCCTGATAAGGACCAGATAGTAGTGACCGGAGAAGGTATTGACCCAGTCAAACTTGCCAAGAAGCTAAAAAAAGGTGTAGGATACTCTGAGCTGGTGAGTGTTGGTCCAGTGGAGGTGAAGAAACCCGTCGCTACAGTTGCTCCAGTGGCTCAACCGCAAACAAAAGTCGTGCCACTGAATGTTTATCCTTACCCTTACTACAATCATGGCATACCCTACCAATACCATGTCCAAAAATCACCCAAAATCCTACTAAAAGCCACCCAAACATCCGTTAAAAATGACCCAGTTTACCCCTTTACTGCTGCTATTTCACAGCAGTACCGAACACATGTTTTTTCTGCTTTCAAAATCGATAGTACTACCTAA 453 43.71 MAKQKIVVKATMENEQKSLKARKIAVSVPDKDQIVVTGEGIDPVKLAKKLKKGVGYSELVSVGPVEVKKPVATVAPVAQPQTKVVPLNVYPYPYYNHGIPYQYHVQKSPKILLKATQTSVKNDPVYPFTAAISQQYRTHVFSAFKIDSTT 150
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g02809 150 Gene3D - 1 67 - -
Cind3g02809 150 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 47 4 119 IPR042885 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g02809 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:339997651 Cind3g02808 Cind-Chr3:340020645 tandem
Cind Cind-Chr3:339808775 Cind3g02809 Cind-Chr3:339997651 tandem