Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g02822	ATGTTTTACACACCTTTGTTAGAACTTAAGAAACACTCACGTACCGATCTACATGGATGTCAGAGTGTTTTGGGTATAATACTTGGAGGTGGAGCGGGGACTCGTCTCTACCCTTTAACAAAGAAGAGGGCGAAGCCAGCTGTTCCTTTGGGAGCAAACTATCGGCTTATTGACATTCCTGTCAGCAATTGCTTGAACAGCAACATTTCAAAGATTTACGTTCTTACACAGTTCAACTCTGCTTCACTTAATCGTCACCTTTCACGGGCTTATGCAAGTAACATGGGTGGTTATAAGAACGAAGGGTTTGTTGAAGTCCTTGCTGCTCAACAAAGTCCTGAGAATCCAAACTGGTTTCAGGGTACTGCCGATGCTGTAAGGCAGTATTTGTGGCTATTTGAAGAGCATAATGTTCTAGAGTTCCTTATCCTTGCTGGAGATCACTTATATCGTATGGATTACGAGAAGTTTATTCAAGCTCACAGAGAAACAGATGCTGATATCACTGTAGCAGCTCTGCCAATGGATGAAAAGCGTGCAACTGCATTTGGTCTCATGAAGATTGATGAAGAAGGGCGTATAATTGAATTTGCAGAGAAACCAAAAGGAGAGCAACTGAATGCTATGAAAGTTGATACTACAATTTTAGGACTTGATGAAGAGAGAGCTAAAGAGATGCCTTATATTGCTAGTATGGGTATATATGTTGTCAGCAAAGATGTAATGTTGAATTTGCTGCGAGATCAGTTCCCCGGAGCAAATGATTTTGGAAATATTGGTACCATTGAGGCTTTCTATAATGCCAATTTGGGAATTACAAAGAAACCAGTGCCAGATTTCAGTTTCTACGATCGTTCATCTCCTATTTACACCCAACCTCGATATTTGCCTCCTTCCAAGATGCTTGATGCTGATGTCACAGATAGTGTTATTGGTGAAGGGTGTGTGATTAAGAACTGCAAAATTCATCATTCTGTTGTTGGACTTCGCTCTTGCATAGCTGAAGGTGCAGTCATTGAAGATTCATTGCTGATGGGAGCAGATTATTATGAGACTGATGCTGACAGGGAGCTTCTTGCTGCAAAAGGTAGTGTTCCGATTGGTATTGGGAAGAACACTCACATCAAAAGAGCAATCATTGACAAGAATGCACGCATAGGAGACAATGTGAAGATTATAAACAGTGATAACGTTCAAGAAGCAGCAAGAGAAACAGATGGGTACTTCATAAAAAGCGGAATCGTGACACTTATTGATATAACCCCAATTCAAATTTGCCTCATTATTGTCTTACTAGAAGAGGCTGCTATTCTTAGTACTTGCAATAGGATGGAGATATATGTCGTGGCTCTTTCTCAGCACCATGGTGTTAAGGAGGTCACCGAATGGATGTCTAAGGTTGAAACAGTTGATGGTCTAAAAGACCTTCATGTTCCTCCTGGAACTCAGCCTAGGGAAACCATAAAACTTTCAAAGATGGGAGTTCCAGATATTAATAAGCCATATGTCAGAGGGCATCATCACTTCACTGTGAATGTTCAGATCCCGAAATATATCAGGTTTATCTTCTAG	1572	40.78	MFYTPLLELKKHSRTDLHGCQSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPKGEQLNAMKVDTTILGLDEERAKEMPYIASMGIYVVSKDVMLNLLRDQFPGANDFGNIGTIEAFYNANLGITKKPVPDFSFYDRSSPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCIAEGAVIEDSLLMGADYYETDADRELLAAKGSVPIGIGKNTHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTLIDITPIQICLIIVLLEEAAILSTCNRMEIYVVALSQHHGVKEVTEWMSKVETVDGLKDLHVPPGTQPRETIKLSKMGVPDINKPYVRGHHHFTVNVQIPKYIRFIF	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g02822	523	SUPERFAMILY	HSP40-DnaJ peptide-binding domain	465	519	IPR008971	GO:0006457(InterPro)\|GO:0051082(InterPro)
	Cind3g02822	523	SUPERFAMILY	Glutamyl tRNA-reductase catalytic, N-terminal domain	431	458	IPR036343	GO:0008883(InterPro)\|GO:0033014(InterPro)\|GO:0050661(InterPro)
	Cind3g02822	523	SUPERFAMILY	Trimeric LpxA-like enzymes	292	418	IPR011004	-
	Cind3g02822	523	CDD	LbH-G1P-AT-C	297	415	-	-
	Cind3g02822	523	Gene3D	Hexapeptide repeat proteins	295	427	-	-
	Cind3g02822	523	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	118	126	IPR005836	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Cind3g02822	523	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	21	257	IPR011831	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Cind3g02822	523	FunFam	Glucose-1-phosphate adenylyltransferase	295	429	-	-
	Cind3g02822	523	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	23	390	IPR029044	-
	Cind3g02822	523	Pfam	Nucleotidyl transferase	25	247	IPR005835	GO:0009058(InterPro)
	Cind3g02822	523	Pfam	DnaJ C terminal domain	463	516	IPR002939	-
	Cind3g02822	523	Pfam	Glutamyl-tRNAGlu reductase, N-terminal domain	432	470	IPR015895	GO:0008883(InterPro)\|GO:0033014(InterPro)\|GO:0050661(InterPro)
	Cind3g02822	523	CDD	ADP-Glucose-PP	34	258	-	-
	Cind3g02822	523	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	29	48	IPR005836	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Cind3g02822	523	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	230	240	IPR005836	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Cind3g02822	523	Gene3D	-	428	480	IPR036343	GO:0008883(InterPro)\|GO:0033014(InterPro)\|GO:0050661(InterPro)
	Cind3g02822	523	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	10	294	IPR029044	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g02822	K00975	glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:339089850	Cind8g01600	Cind-Chr8:34116654	dispersed
	Cind	Cind-Chr3:339089850	Cind3g02817	Cind-Chr3:339357500	proximal