Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g03214	ATGGCAACAATAGCAGCTAAAAGATTCTCAGTCAAGACAGACGGATGTGGAAGTCAAAACAACATGGCAAGAAATCAAGTTAAAGACGTTTTTAACCGGCTTGGTTGTGAAAATCAACAAAATATTGCAAGAAGTTATCCAGTGCAACCTGTCGTATGCAAGTATTGGCTAGAGGGAAGATGTGTTAGAAATCCCTGCAGATTTTTGCACCCAGACCTACCAAAACTGGATACAGTCAAGTCAAAACACTCTTGGAAGAATCCAAACACTTTTAAGTCGAGGAATTCACCTCCTGTTGAGAAGCCGCAACAAAAAGTTATGAAGAACAATGAGAACCGTGAACATTATCAGATTGTCTCAAAGACACTAAAAGGGTGTGTTGACCATAAAGTTATTGGGAAGACGGTGAACTGCCCAAATGGCAAGAATTTGCAATCGTGGCTCTGTGGTAGTGGACTCTCGATGTTGGCACAGTTGGAAGGTCATACAAAGGGTGTAACTGGGATTGTCTATCCATCTGGATTCAACAAGCTTTTCTGCGGCAGTAAGGACAAATCACTGAGAGTTTGGGATTGTAATAGCGGAAAGTGTGACAATGTGCTCAACTTTGATGACGAGTGTGAAACGTTAGTCAAAGAAGGTTCATGGATGTTTGCTGGGCTGCGAGATAAGATTAAGGCTTGGAATCTCGAAACTCAAAGTGAAGTCATTATTCGAGGATATGGTGGACAACCGGCAGCCCAATTTCCAGCATATCCTGTTTGTGACATCACTGAGAATGATGAGACAGTTGATAATCCAATACACGTTCCTCAGAGCTCAAGTGAAAAGAATGCAGAGAACGCATATGTCCAACCAGCTACCATGCTTTCCGGAATACCGTCGCCTGAAACAGATGCAACAACAGCCCAAAAAATGACGGCCACTGAAAGCATAACTCAAAAGACAAAAGTAAAGGATGCAAAATTGAAAGTCCTAGAAGATACATCCATCGCTGAAAGGGACACACCACCTCCTCAGCTTGAACTGACAACGCAACATATCCAACCATCCCCAACAGAAATAACAAGCACAATAGACAAAGTGGTTACCAACCAAGGATCAACACAAGGCTATCTTTTCACTGCCATTGATGGAAAAGGTGCTTTCCTCAACGGAAATCCTATCAAAGTTCTTCCCTCAGTTGATCATCATTCTGCAATGGCTTATCAGACCATTCAAGGCGGTCTCCTTGAAGTCACCGTTGTTAGTTGCAATAAACTAAGGGATACCGAATGGTTCTCAAGGCAAGATCCTTATGTTAGCGTCGAATATGGTAGCTATAAATCATCAACTCGTACTTGTACAGATGGAGGCAAGTGCCCCACATTTCAAGAGAAGTTTGTGTTTAGCTTGATTGAAGGGTTAAGAGACATAAGTGTTTCGGTTTGGAATAGCAATACACTTACACATGATGACTACATTGGCGGTGGAAGAATTCCGTTGACAAAGGTTCTTTCTCAAGGATTTGATGATAGTAGTTGGCCGTTACAGAGTAAAACCGGAAGGCATGCCGGAGAGGTTAGACTGATAATGCATTATTCCAATGCCAATAATCCTGGTGCTCAAAAGCCATCAAAAGGTCTTGCTCCACAAGGTGCACCTTCCGGATCCATGTACCCAGCAGCGCCCCCGTCCATGTACGGCGCACCACCTCCGGGTCCTATGTACCCTGCACCACCACCAGGGCCCATGTACCCCTCGTACCCCCCAAATCCAAGTGCGTATCCACCCGCTCCATACCCAAATCAGATCCCTAACTATCCTCCTACGCCATATCCTTATGGATCACAGTATCCCCCAGGTTCTGCGTTCCCAGGCTCGTATCCTCCACCACCTTATTGA	1884	44.43	MATIAAKRFSVKTDGCGSQNNMARNQVKDVFNRLGCENQQNIARSYPVQPVVCKYWLEGRCVRNPCRFLHPDLPKLDTVKSKHSWKNPNTFKSRNSPPVEKPQQKVMKNNENREHYQIVSKTLKGCVDHKVIGKTVNCPNGKNLQSWLCGSGLSMLAQLEGHTKGVTGIVYPSGFNKLFCGSKDKSLRVWDCNSGKCDNVLNFDDECETLVKEGSWMFAGLRDKIKAWNLETQSEVIIRGYGGQPAAQFPAYPVCDITENDETVDNPIHVPQSSSEKNAENAYVQPATMLSGIPSPETDATTAQKMTATESITQKTKVKDAKLKVLEDTSIAERDTPPPQLELTTQHIQPSPTEITSTIDKVVTNQGSTQGYLFTAIDGKGAFLNGNPIKVLPSVDHHSAMAYQTIQGGLLEVTVVSCNKLRDTEWFSRQDPYVSVEYGSYKSSTRTCTDGGKCPTFQEKFVFSLIEGLRDISVSVWNSNTLTHDDYIGGGRIPLTKVLSQGFDDSSWPLQSKTGRHAGEVRLIMHYSNANNPGAQKPSKGLAPQGAPSGSMYPAAPPSMYGAPPPGPMYPAPPPGPMYPSYPPNPSAYPPAPYPNQIPNYPPTPYPYGSQYPPGSAFPGSYPPPPY	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g03214	627	Gene3D	C2 domain	408	529	IPR035892	-
	Cind3g03214	627	SMART	C2-3c	410	507	IPR000008	-
	Cind3g03214	627	CDD	C2	411	508	-	-
	Cind3g03214	627	ProSiteProfiles	Trp-Asp (WD) repeats circular profile.	159	191	-	-
	Cind3g03214	627	PANTHER	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790)	401	626	IPR052981	-
	Cind3g03214	627	Pfam	C2 domain	409	501	IPR000008	-
	Cind3g03214	627	ProSiteProfiles	Trp-Asp (WD) repeats profile.	159	200	IPR001680	GO:0005515(InterPro)
	Cind3g03214	627	Gene3D	-	138	242	IPR015943	GO:0005515(InterPro)
	Cind3g03214	627	ProSiteProfiles	Zinc finger C3H1-type profile.	47	73	IPR000571	GO:0046872(InterPro)
	Cind3g03214	627	SMART	WD40-4	152	191	IPR001680	GO:0005515(InterPro)
	Cind3g03214	627	SUPERFAMILY	C2 domain (Calcium-lipid-binding domain, CaLB)	407	529	IPR035892	-
	Cind3g03214	627	MobiDBLite	consensus disorder prediction	529	551	-	-
	Cind3g03214	627	SUPERFAMILY	WD40 repeat-like	151	236	IPR036322	GO:0005515(InterPro)
	Cind3g03214	627	SMART	c3hfinal6	47	72	IPR000571	GO:0046872(InterPro)
	Cind3g03214	627	Pfam	WD domain, G-beta repeat	156	191	IPR001680	GO:0005515(InterPro)
	Cind3g03214	627	ProSiteProfiles	C2 domain profile.	392	509	IPR000008	-
	Cind3g03214	627	MobiDBLite	consensus disorder prediction	563	627	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g03214	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	67063	Cind1g00025	Cind3g03214
	67954	Cind3g03214	Cind8g02419

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr1:338428188	Cind3g03214	Cind-Chr3:373082065	dispersed
	Cind	Cind-Chr3:373082065	Cind6g00510	Cind-Chr6:185025437	dispersed
	Cind	Cind-Chr1:247954323	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr1:416006118	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr1:275665576	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr2:265579459	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr2:49031486	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr2:217118315	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr3:280611143	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr3:280609507	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr9:169650283	Cind3g03214	Cind-Chr3:373082065	transposed
	Cind	Cind-Chr3:373082065	Cind8g02419	Cind-Chr8:231286904	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Cind	C2	4.6e-15	CL0154		TF	C3H