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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g03253 ATGAAGACAATTAGATACTTGGGGAAAAAAAGAAAGAAACTCAAGACGAAACAACGACATCGTTTCAACCTTTGTCGTAGCAAGAGTACTCTTGATGATGATCATGCTGGTGACGTCACTGATGATGATGTTAAGGAGTTGAAAGCTTGTTTTGATTTAGGGTTTGGTTTTGATAAGCTGGATGATATGGACCCGAAACTTACGCATGCTTTTCCTGCGCTCGAGCTGTATGCTGCGGTTAAACGAGGGTATAATGGTGGTGGAATGTTGTCAAGGTCTTCGTCGTCGATTAGTACTGATTCGTGTTCGAGTTCTTCTTCAAGCGTTGCTACTACGTCTATTGTTGATCCAAGTGATGATCCGCAAAAGGTAAGGGCGAAACTGAAACAATGGGCTCAACTCGTTGGTTGTTCGATTCAGGAAACTTCTTCCAACGACAAAAATGTTGCACAATAG 456 42.11 MKTIRYLGKKRKKLKTKQRHRFNLCRSKSTLDDDHAGDVTDDDVKELKACFDLGFGFDKLDDMDPKLTHAFPALELYAAVKRGYNGGGMLSRSSSSISTDSCSSSSSSVATTSIVDPSDDPQKVRAKLKQWAQLVGCSIQETSSNDKNVAQ 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g03253 151 MobiDBLite consensus disorder prediction 90 122 - -
Cind3g03253 151 PANTHER OSJNBA0071G03.3 PROTEIN 11 140 - -
Cind3g03253 151 MobiDBLite consensus disorder prediction 90 118 - -
Cind3g03253 151 Pfam Protein of unknown function (DUF1685) 39 96 IPR012881 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g03253 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr1:339705636 Cind3g03253 Cind-Chr3:372253453 dispersed
Cind Cind-Chr1:339717331 Cind3g03253 Cind-Chr3:372253453 dispersed
Cind Cind-Chr3:372253453 Cind7g02688 Cind-Chr7:66092297 dispersed
Cind Cind-Chr3:372253453 Cind9g00120 Cind-Chr9:120951364 transposed