Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g03516	ATGATGGCTTTAAGATTTGGGGTTTATTGTGATCCCATAAACCCTGCTCCTTCCAGTTACAAATCATCAGCAATCTTGATGGACAATCGCAAAAACAATCTTACTTGTATTCGAGCTCAACAGTCTAAGACGAAAGACGTGCCTATAATTACTACTTCATCCAATGTATCCCTAATTGAAGAACTGAAAAGTAAAGATTGGGAAATTGGAGTTTTAAAAGATGAAATAGCTGCAACTCAGGGAATTCGAATAAGAAGACGGCCTCCGACAGGACCTCCTTTGCATTATGTTGGTCCTTTGGAGCTCCTTTTACAGAATGAAGGGAATAGTCCCCGTAACATACTTGAAGAAATTGTATGGAACAAAGATGTAGAGGTTACCCAGATGAAAGAGAGATATCCACTATTTTCGCTAAAAGAGGCTCTCAACAGTGCTCCTCCTTCAAGGGACTTTGTAGGAGCTCTCAAGGCGTCATATTTGCGAACTGGAGTGCCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCACCGAGTAGAGGAGTTCTAAGGGAAGATTTTCACCCTGTTGAAGTTGCAAAAGCATATGAGAAAGGTGGAGCAGCATGCCTCAGTGTTTTGACCGATTCAAAATATTTTCAGGGGAGCTTCGAGAATCTAGAGGCTATACGGAATGCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGAGTTCATTGTCGATGCATGGCAGCTGTATTATGGGCGAACAAAGGGTGCAGATGCTGTTTTGTTAATTGCAGGTGTCTTACCAGATCTTGACATCAAATACATGCTTAAGATATGCAAAATGATTGGACTGACAGCACTCGTTGAGGTACATGATGAAAACGAAATGGATCGCATGCTGGCAATTGATGGCATTGAACTCATTGGCATCAATAACCGTAACCTTGAAACATTTGAAGTTGATATTAGTAACACAAAGAAGTTGCTTGAAGGGGAGCGTGGGGAGAAGATCAGACAGAAGGACATAATAGTGGTCGGGGAGTCTGGACTGTTTACTCCTGCAGATATTGCTTATGTACAAGAAGCTGGCGTGAAAGCTATATTGGTCGGGGAGTCAATTGTGAAGCAGAAAGATCCGACACAAGGAATTAGAGAACTTTTTGGAAAAGATATATCAGCTTAG	1161	41.77	MMALRFGVYCDPINPAPSSYKSSAILMDNRKNNLTCIRAQQSKTKDVPIITTSSNVSLIEELKSKDWEIGVLKDEIAATQGIRIRRRPPTGPPLHYVGPLELLLQNEGNSPRNILEEIVWNKDVEVTQMKERYPLFSLKEALNSAPPSRDFVGALKASYLRTGVPGLIAEVKKASPSRGVLREDFHPVEVAKAYEKGGAACLSVLTDSKYFQGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYGRTKGADAVLLIAGVLPDLDIKYMLKICKMIGLTALVEVHDENEMDRMLAIDGIELIGINNRNLETFEVDISNTKKLLEGERGEKIRQKDIIVVGESGLFTPADIAYVQEAGVKAILVGESIVKQKDPTQGIRELFGKDISA	386

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g03516	386	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	57	382	IPR045186	GO:0000162(PANTHER)\|GO:0004425(InterPro)\|GO:0004425(PANTHER)\|GO:0004640(PANTHER)
	Cind3g03516	386	FunFam	Indole-3-glycerol phosphate synthase chloroplastic	107	385	-	-
	Cind3g03516	386	SUPERFAMILY	Ribulose-phoshate binding barrel	122	381	IPR011060	-
	Cind3g03516	386	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	167	185	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Cind3g03516	386	Pfam	Indole-3-glycerol phosphate synthase	115	379	IPR013798	GO:0004425(InterPro)
	Cind3g03516	386	CDD	IGPS	151	379	IPR013798	GO:0004425(InterPro)
	Cind3g03516	386	Gene3D	Aldolase class I	107	385	IPR013785	-
	Cind3g03516	386	Hamap	Indole-3-glycerol phosphate synthase [trpC].	113	381	IPR013798	GO:0004425(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g03516	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	67976	Cind3g03516	Cind8g02160

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:341809865	Cind9g00060	Cind-Chr9:116493937	dispersed
	Cind	Cind-Chr3:341809865	Cind8g02160	Cind-Chr8:246713908	wgd