Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g03525 | ATGATGCTTCAGACAATTATAATGGTGGTTGTCGTATCGTATTTTGTAATGACCGATGTTGTTGTTGGAATTAGATTTGTGATTGATAGAGAAGAATGTTTGTCTCATAATATCGAATATGAAGGCGATACTGTTCATGTTTCTTTCGTTGTAATCAAGGCTGAATCGCCTTGGCATTTCTCTGAAGACGGCGTTGATCTTGTGATTAGAGACCCGACAGGAGAGTTGGTTTATGATGTATATGACAGCGCTAGTGAGAAGCACGAGTTCATAGCTCATAAAAAAGGTTTATATAACTTTTGTTTCACAAACAAGTCTCCGTATCACGAGACTGTTGACTTTGATGTTCAAGCTGGACATTTTGCACACTATGATCAGCATGCAAAAGATGAGCATATCAAGCCGTTGTTTGATCAGATAGCAAAACTGGAAGAAGCTCTATACAACATTCAGTTTGAACAGCATTGGTTACAAGCTGAGAATGATCGCCAGGCAGTTGTAAATGAAAAAATGGGTAAGAGAGCAGTCCACAAGGCGCTGATTGAATCAGCAGCACTGATTGGAGCTAGCATCCTCCAGGTTTATCTTCTGCAACGCCTGTTTGAGCGAAAGCTTGGATCTTCAAGAGTGTAA | 633 | 40.13 | MMLQTIIMVVVVSYFVMTDVVVGIRFVIDREECLSHNIEYEGDTVHVSFVVIKAESPWHFSEDGVDLVIRDPTGELVYDVYDSASEKHEFIAHKKGLYNFCFTNKSPYHETVDFDVQAGHFAHYDQHAKDEHIKPLFDQIAKLEEALYNIQFEQHWLQAENDRQAVVNEKMGKRAVHKALIESAALIGASILQVYLLQRLFERKLGSSRV | 210 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g03525 | 210 | Pfam | emp24-gp25L-p24 family-GOLD | 30 | 202 | IPR009038 | - | |
| Cind3g03525 | 210 | PANTHER | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN | 10 | 202 | IPR015720 | GO:0005783(PANTHER)|GO:0005793(PANTHER)|GO:0005794(PANTHER)|GO:0006886(PANTHER)|GO:0006888(PANTHER)|GO:0007030(PANTHER)|GO:0030134(PANTHER) | |
| Cind3g03525 | 210 | SMART | EMP24-GP25L-2 | 23 | 202 | IPR009038 | - | |
| Cind3g03525 | 210 | ProSiteProfiles | GOLD domain profile. | 31 | 118 | IPR009038 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g03525 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr2:348151162 | Cind3g03525 | Cind-Chr3:343149215 | dispersed | |
| Cind | Cind-Chr2:348126707 | Cind3g03525 | Cind-Chr3:343149215 | dispersed | |
| Cind | Cind-Chr3:343149215 | Cind2g05597 | Cind-Chr2:348153245 | dispersed | |
| Cind | Cind-Chr1:355627600 | Cind3g03525 | Cind-Chr3:343149215 | wgd |